Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0811 ATGGCTGGTGAGATGTGTGAAGACAAATCGAGGGAGATGGTATCATCGTCAGCTGGATTCTGTTACTCCGAGGTATCGACGGGCAACCCGGCGATCCAAACCCATCTGGGGAATCAGATCCAAGGGTTTGAGTCCGACCCGGCGGACATGTTCAACCTCACCACAAGCATGGACATGATTGGCTTCTCCAAGAATCTTCATCATCACCAACAAAGTGAAAGTATCGTGTGGAAAAGCTTTCCGGGTAAACCCACCCACCCCAATCCGGGTCCTTCTTCTTCTTCCAAGACGGCCATGAACAATGAGTCTGGTTCCACCAATTTCTATCAGTACACTACGAAACCAGATTTCACATCCAACGACAATCTGATTATTGGAGGAGCTCATCATCATCATCATGATTCTTCGTCTACCACTTGGCAAGATAACAGGTTACTTGTTGATGATTCTTCTTTAAGGTGTGTGTTCCCTTGTGAAGGAAACGAAAGGCCAAGTCAGGGCCTTTCGCTCTCTCTCAGTTCCAATAATCCCTTAAGCATTGGGTTACAATCTTTTGAACTGAGACAGACCAACAACCACCCTCATCATCATCACCAGAACCAACCAGACTTTGTTTCTTCAACAAGTGGAGACAAGTTATTGTTGGGAAAATCAATGAATCCTCAACACCAACAGCAAGAAGATGAAGCTGGTGGGAACCTGTATCAAGGCCATTTTCTTCTCAAGAACTCTAGGTATTTGGTCGCTGCACAAGAACTTCTCAACGAGTTTTGCAGTCTGGGAATGAAGCAAGGTGACATGGTGAAGCAAAAGTCATCAAGTCACAAAAGCAAGCAGTGGGAAGATGATAATGGAATCGGTCTCTGCAAGAAACATCCCGTTGGCTCTCTAGAATTTATCGAATTGCAGAAGAGAAAGACCAAACTACTCTCCATGCTGGAAGAGGTTGAGAGGAGATACAGGCACTACTGCAACCAAATGAAGGCGGTGGTGTCGTCTTTCGAGGAGGTGGCCGGGACCGGAGCGGCGAGGGTTTACTCGGCGTTGGCATTGAAGGCGATGTCGAGGCATTTCAGGTGTTTGAAAGATGGGATATTGAGTCAGATAGAAGTAGCAAGAAGAGGCATGGGAGAGAAAGATCCAGTTGCACCAGGAACTACAAAAGGCGAAACACCAAGACTCAGAATCATAGACCAAGCACTGAGACAACAGAGAGCTTTCCAGCAAATGAGCATGATGGAGAGTCATCCATGGCGACCCCAGAGAGGCCTTCCCGAACGATCTGTATCAGTTCTTCGAGCTTGGCTTTTCGAGCATTTTCTTCATCCGTACCCAAGCGATATGGATAAACATATCTTAGCTCGCCAAACTGGTCTCTCAAGAAGCCAGGTATCAAACTGGTTTATTAATGCAAGAGTGAGGCTGTGGAAGCCAATGGTAGAAGAGATGTACTTGGAGGAAATGAAGGAGCATGAAAACAACATGGCCTCTTCTGAGGGAGTCAGTGATCCCGGCGTCGATGACAACAACATGTTGGCTGTTGCCACCAGCGGCCGGAACCTCGACAATCCACCTCCCACGTCACGGATGCCGGAAGATCAGAAGCCACTCCGGAACAACCACCGGTTGCTCCGAATAGATTCCGAGTGTGTGTCTTCTATCATAAACAACCATCCACCAGCTGATCATCACAAGAACGAGTCCTCCACCAAGAACAACAGCGATCCCCAAGATCAACACTGTAATAACAACACATTTGGATCCGTGGAGCTTGATTTTTCATCTTACAACACTCATCATCACCACTCAGCTGCTGGCATTGTTTCTTACAGTAATGAGAATAATAACAGTGGTGGAGGCGTGTCGTTGACGCTAGGGTTACAGCAACACGGCGAAGCTGGGGTTAGTCTGGCGTTTCCGCCACCGTCTCAGTTGTCACTATTCTATCCAAGAGATCAAATGGAAGATTGTCAACCTGTTCAGTACTCACTCTTGGACGGCGAAGCACAAAACCTTCCTTACAGAAATTTAATGGGTGCACAGTTGCTTCATGACTTGGCAGGATAG 2067 0.4722 MAGEMCEDKSREMVSSSAGFCYSEVSTGNPAIQTHLGNQIQGFESDPADMFNLTTSMDMIGFSKNLHHHQQSESIVWKSFPGKPTHPNPGPSSSSKTAMNNESGSTNFYQYTTKPDFTSNDNLIIGGAHHHHHDSSSTTWQDNRLLVDDSSLRCVFPCEGNERPSQGLSLSLSSNNPLSIGLQSFELRQTNNHPHHHHQNQPDFVSSTSGDKLLLGKSMNPQHQQQEDEAGGNLYQGHFLLKNSRYLVAAQELLNEFCSLGMKQGDMVKQKSSSHKSKQWEDDNGIGLCKKHPVGSLEFIELQKRKTKLLSMLEEVERRYRHYCNQMKAVVSSFEEVAGTGAARVYSALALKAMSRHFRCLKDGILSQIEVARRGMGEKDPVAPGTTKGETPRLRIIDQALRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDMDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEMKEHENNMASSEGVSDPGVDDNNMLAVATSGRNLDNPPPTSRMPEDQKPLRNNHRLLRIDSECVSSIINNHPPADHHKNESSTKNNSDPQDQHCNNNTFGSVELDFSSYNTHHHHSAAGIVSYSNENNNSGGGVSLTLGLQQHGEAGVSLAFPPPSQLSLFYPRDQMEDCQPVQYSLLDGEAQNLPYRNLMGAQLLHDLAG 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0811 688 Gene3D - 421 483 - -
Prci5g0811 688 MobiDBLite consensus disorder prediction 554 586 - -
Prci5g0811 688 MobiDBLite consensus disorder prediction 572 586 - -
Prci5g0811 688 SUPERFAMILY Homeodomain-like 419 485 IPR009057 -
Prci5g0811 688 Coils Coil 299 319 - -
Prci5g0811 688 MobiDBLite consensus disorder prediction 78 109 - -
Prci5g0811 688 FunFam BEL1-like homeodomain protein 4 421 483 - -
Prci5g0811 688 CDD homeodomain 418 479 IPR001356 GO:0003677
Prci5g0811 688 ProSiteProfiles 'Homeobox' domain profile. 415 478 IPR001356 GO:0003677
Prci5g0811 688 Pfam Homeobox KN domain 435 474 IPR008422 GO:0003677|GO:0006355
Prci5g0811 688 MobiDBLite consensus disorder prediction 192 228 - -
Prci5g0811 688 SMART HOX_1 418 482 IPR001356 GO:0003677
Prci5g0811 688 MobiDBLite consensus disorder prediction 201 228 - -
Prci5g0811 688 MobiDBLite consensus disorder prediction 89 109 - -
Prci5g0811 688 Pfam Associated with HOX 241 365 IPR006563 -
Prci5g0811 688 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 173 501 - -
Prci5g0811 688 MobiDBLite consensus disorder prediction 491 538 - -
Prci5g0811 688 SMART prehox3 235 367 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0811 Prci-Chr5 20610774 20615058 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0811 143 687 Homeobox Transcription Factor Family AT5G41410 45.347 7.11e-133 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Prci5g0811 POX 9.9e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0811 - - tcc:18606572 826.624