Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0766 ATGGTGCTAGAGAACATGAAGAAACAACTTGCTTTGGCTGTGAGGAGCATCCAGTGGAGCTATGCAATATTCTGGTCTGCTTCTAGTTGCCAACCCGGGGTTTTGGAATGGGGTGAGGGATATTACAATGGCGACATAAAGACTCGGAAAACAAGTCAGGCAGTACAACTTAGGTCTGATCAAATAGGTTTGCAGAGGAGTGAACAGTTGAGAGAGCTATTTGAGTCCCTCGCAACTGCAGAATCGACACAACAAACAAAAGGGCCTTCAACTGCGCTAAGCCCTGAGGATCTCACAGATACTGAGTGGTATTACTTGGTTTGCATGTCCTTTGTGTTCAATATTGGCCAAGGATTACCTGGACGAACTCTGGCAAATGACCAACCTATTTGGGTTTACAATGCCCCTTTTGGTGATAGTAGAATTTTCAGTCGCTCTCTGCTTGCAAAGAGTGCATCAATTCAGACGGTGGCATGCTTCCCATTTCTGGAAGGTGTAGTTGAGCTCGGGACAAGTGATCTGATCTCAGAAGACCTCAGTCTCATTCAACCATTTGGCCACAGTGCTTATTATGCCAAATTACCAGAAGTGGGATCTGCTGTAAACAATAAAACTTCTCCCAATAGTTTGAGTGCGATTGAAGCAAACCAACTGGCAGATGAGACACACGTGGTTGAAAGAGTAGATGGTGGTTCTTCTTTGGTCCATAGCTGGCAAGTTAGGGATGACGAATTTTGTAACGATGCCCATAACTCCATGATTTCTAGTGACTGTAGTTCTCAAACTCTGGCTGATCCTGAAAAGATAGCCTGTTGTCCTAAGGATCAAAACCCAACTGACCATTCTGTGCTAGACCACCAGGAGTGCAATAAAACGAAAATGACCTTAAAGAATTGTCGAAATGATGGTTGGCATTATCGAAAAGTTCTCTCTGCGGTTCTAAAAGACTCAGACCAGTCTGTAATTAGAGCACATTTTCAAAGTAGTAATAAGGAATCCAGCTTTGTTAGTTACAAGAAAGGAGGGTCAATGAGTTATCAAATGCTAAAAGGAGGAACCCCACAGAAGTTGTTGAAAAAGGTATTGCTTGAAGTTCCTCGGATGCATATGGATGGGCTTCTTGAGTGTCAAGAAGAAAATGATTACAAAGAGCAAATGAGACCAGAGGTTGATGAAATTGGTATGAACCATGTATTGTCAGAAAGAAGGAGAAGGGCAAAACTAAATGAAAGGTTTCTAACACTTAGATCAATGGTTCCTTCAGTTAGTAAGGATGACAAAGTTTCAATACTGGACGAGGCAATTGAATACCTCAGAAAGCTTGAGAAGAAGATTAGAGAGTTGGAAGCATGTAGGGAGCTAATAGATTTAGAAACCAGAGCTAAAAGAACACCTCAAGATATGGTAGAGAGGACTTCTGATAATTATTTTAACAAAACTGATAATGGCATGAAGCCAATGCATAACAAGAGAAAGGCATGTGACGTTAAAGAAACATGGCAAGAAAATGATTCAGTTGCCCTAAATGACAGCTCTACTAGTAGCGTCATTATCAATATGAGCAACACCGAAGTTCTGATTGAAATGAAACATCCATGGAGAGAAGGAGCAGTGATGAAAATTATGGAAGCACTTAGGAATCTCCACTTGGATTTACGATCAATTCAGTCATCAGAAGTTGGTGGGATTCTTCATCTAACCATTAGATCTCAGATGAGAGGGCCAACTATTGCATCAGCGAAGAAGATAAAACAAGTGCTGCAAAAAGCGGCTTGGAACTGTTGA 1785 0.4151 MVLENMKKQLALAVRSIQWSYAIFWSASSCQPGVLEWGEGYYNGDIKTRKTSQAVQLRSDQIGLQRSEQLRELFESLATAESTQQTKGPSTALSPEDLTDTEWYYLVCMSFVFNIGQGLPGRTLANDQPIWVYNAPFGDSRIFSRSLLAKSASIQTVACFPFLEGVVELGTSDLISEDLSLIQPFGHSAYYAKLPEVGSAVNNKTSPNSLSAIEANQLADETHVVERVDGGSSLVHSWQVRDDEFCNDAHNSMISSDCSSQTLADPEKIACCPKDQNPTDHSVLDHQECNKTKMTLKNCRNDGWHYRKVLSAVLKDSDQSVIRAHFQSSNKESSFVSYKKGGSMSYQMLKGGTPQKLLKKVLLEVPRMHMDGLLECQEENDYKEQMRPEVDEIGMNHVLSERRRRAKLNERFLTLRSMVPSVSKDDKVSILDEAIEYLRKLEKKIRELEACRELIDLETRAKRTPQDMVERTSDNYFNKTDNGMKPMHNKRKACDVKETWQENDSVALNDSSTSSVIINMSNTEVLIEMKHPWREGAVMKIMEALRNLHLDLRSIQSSEVGGILHLTIRSQMRGPTIASAKKIKQVLQKAAWNC 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0766 594 PANTHER TRANSCRIPTION FACTOR TT8 4 591 - -
Prci5g0766 594 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 183 IPR025610 -
Prci5g0766 594 SMART finulus 398 447 IPR011598 GO:0046983
Prci5g0766 594 Gene3D - 395 465 IPR036638 GO:0046983
Prci5g0766 594 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 395 457 IPR036638 GO:0046983
Prci5g0766 594 Coils Coil 431 458 - -
Prci5g0766 594 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Prci5g0766 594 Pfam Helix-loop-helix DNA-binding domain 396 442 IPR011598 GO:0046983
Prci5g0766 594 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 392 441 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0766 Prci-Chr5 18679171 18685393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0766 2 594 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 44.444 1.90e-163 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci5g0766 bHLH-MYC_N 3.7e-47 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0766 - - ahf:112732736 731.095