Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0763 ATGGATGGGAGAGAAGCTATGGCATTCTCTGGTGGCTCAGCTTCATATTACATACATAGAGGAAATGTTTCTGGGTCTGGCTCTGGAACACAGGCCCAGGGGTTCCAACAAACACCTCCTGGGTTTAGACCTTTGTCAAACGCTGGCTTTCAAGCTCAGTCAAATGTCCGAGGTGTTTCTGTGGGTTCTACATTTCCAGTGGAGCCTCCTCGTAGCAATTTTAGTCCAGGCATTAATATAAGTTCCTCTCCTGGAGTACATTCAGGTGAGCCCTTGAAAAAGAAGAGAGGAAGGCCGCGTAAATATGGTCCTGATGGCCCTGTTTCTTTGGGACTGTCTCCCATGTCTGCAACTGCTAATTCTGCGCCAGGTTCAGGCACACCTTCCCAGAAACGGAATAGAGGACGGCCACCTGGAACTGGCAGGAAGCAGCAGCTAGCGGCTCTAGGTGAATGGATGAACAGTTCAGCGGGACTTGCTTTTGCACCTCATGTTATCACCATTGGAGCTGGGGAGGACATTGTAGCAAAGTTGTTGTCTTTATCACAGCAGAGACCAAGGGCTCTGTGCATCATGTCAGGCACTGGCACAGTTTCTTCAGTCACTCTACGCCAACCTGCTTCAGCAAACATCAGTCTCACTTACGAGGGCCGGTTTCAAATTTTATGCTTGTCTGGCTCATATTTGGTTTCTGAGGATGGCGGACCTTGTGATAGAACTGGTGGTTTGAGTGTTTCTCTTTCTAGCCCTGAGGGTCATGTTATTGGTGGTGGTGTTGCTGTGCTTATCGCTGCAAGCCCAGTGCAGGTGGTGGTGTGCAGTTTTGTATATGGAAGTGCTAAGATGAAGACAAAGCAAGTAACCTCTCCCAAGGGTGAGAAGAATTCTGAGCCTCAGACTCAAAATCCTCCTCAGGCTCAGGCTCAGCCTCTTCGTGATGGTAGTAACAAGTTCAGTAGCCCTATTACTCCTGCAAGTGCTCAAAACTACACATTGTCAGCATCATCAGCCATGTGGCCAGGAGACCTGAAAAGCTCACACACACACACTCGTACTGGTATTGACTTGACCCGAGGCTGA 1080 0.4907 MDGREAMAFSGGSASYYIHRGNVSGSGSGTQAQGFQQTPPGFRPLSNAGFQAQSNVRGVSVGSTFPVEPPRSNFSPGINISSSPGVHSGEPLKKKRGRPRKYGPDGPVSLGLSPMSATANSAPGSGTPSQKRNRGRPPGTGRKQQLAALGEWMNSSAGLAFAPHVITIGAGEDIVAKLLSLSQQRPRALCIMSGTGTVSSVTLRQPASANISLTYEGRFQILCLSGSYLVSEDGGPCDRTGGLSVSLSSPEGHVIGGGVAVLIAASPVQVVVCSFVYGSAKMKTKQVTSPKGEKNSEPQTQNPPQAQAQPLRDGSNKFSSPITPASAQNYTLSASSAMWPGDLKSSHTHTRTGIDLTRG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0763 359 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 55 335 IPR039605 GO:0003680
Prci5g0763 359 MobiDBLite consensus disorder prediction 19 86 - -
Prci5g0763 359 MobiDBLite consensus disorder prediction 284 347 - -
Prci5g0763 359 Pfam Plants and Prokaryotes Conserved (PCC) domain 163 276 IPR005175 -
Prci5g0763 359 ProSiteProfiles PPC domain profile profile. 155 297 IPR005175 -
Prci5g0763 359 CDD DUF296 163 275 IPR005175 -
Prci5g0763 359 Gene3D - 163 292 - -
Prci5g0763 359 MobiDBLite consensus disorder prediction 19 144 - -
Prci5g0763 359 MobiDBLite consensus disorder prediction 113 134 - -
Prci5g0763 359 MobiDBLite consensus disorder prediction 284 359 - -
Prci5g0763 359 SUPERFAMILY AF0104/ALDC/Ptd012-like 161 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0763 Prci-Chr5 17765074 17770016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0763 1 359 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 51.015 9.66e-99 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0763 - - qsa:O6P43_034235 481.87