Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0761 ATGGCTCTTGTTAATTGGTTAGGAGCTGCGATTGCTTGGGAAGCAGAGAAGACACTAGTGATTGAAGAGGTAGAAGTAGCGCCTCCACAGGCCGGAGAAGTGCGTCTAAAAATCCTCTTCACGTCCCTTTGTCATAGTGACCTTTCCTTCTGGGAAGCCAAGGGACAGACGCCAATGTTCCCCCGTATATTTGGTCACGAAGCAGCAGGGATAGTGGAGAGTATAGGGGAGGGCGTGACTAATCTGAAACCGGGAGACCATGCTGTGCCTGTATTCACTGGCGAGTGTGGAGAATGCCGGCATTGTAAGTCGGAAGAGAGCAACATGTGTGACCTTCTTGTAGTAAACCCGGATCGAGGTGTTATGATCAATGACGGCAAATCCAGGTTTTGTTCTCTAAGAATTAATGTACAGCCCATTTATCATTTTCTCGGGACCTCTACGTTCAGCGAATACACCGTTGTCCATGCTGGACGTGTTGCTGACATCAAGCCTGCTGCCCCTCTTGACAAAGTTTGTCTCCTCAGTTGTGGATTCTGCACAGGTTTCGGTGCTACTGTGAATGTTGCAAAACCAAAGCCTGGTTCCTCTATTGCTATCTTCGGACTTGGAGCTGTTGGCCTCGCTGCTGCTGAAGGGGCAAGGCTTTCTGGTGCATCTAGAATCATTGGAGTTGACTTGAATTCCAGCCGTTTTGAGCAAGCCAAAAAATTTGGGGTTAACGAGTTTGTGAACCCAAAAGATCATGACAGGTCTGTGCATGAAGTATATAGAAACTATTTAATTGAGATGACTAATGGAGGTGTGGATCGTGCGATTGAATGCTCAGGGAGCATCCAAGCCATGACGTCAGCATTTGAATGCGTCCATCATGGTTGGGGTGTTGCTGTACTGGTTGGACTGCCAAGAAAGGATGATGCATTCAAAACTCATCCAATGAACTTATTGTTTTCTCTAACTTTGAAGGGAACCTGTTATGGCAACTTGAAGCCCCGATCCGATCTTCCTTCTACTGTGGAGAAATACATGAAAGGGGAGCTGGAATTAGAGAAGTTCATCAGCCATTATGTGCCATTCTCAGAGATTAACAAAGCCTTTGAATACATGTTGAAGGGGGAATCCATCAGATGCATCATTTGTATGCAAGATTAA 1152 0.4618 MALVNWLGAAIAWEAEKTLVIEEVEVAPPQAGEVRLKILFTSLCHSDLSFWEAKGQTPMFPRIFGHEAAGIVESIGEGVTNLKPGDHAVPVFTGECGECRHCKSEESNMCDLLVVNPDRGVMINDGKSRFCSLRINVQPIYHFLGTSTFSEYTVVHAGRVADIKPAAPLDKVCLLSCGFCTGFGATVNVAKPKPGSSIAIFGLGAVGLAAAEGARLSGASRIIGVDLNSSRFEQAKKFGVNEFVNPKDHDRSVHEVYRNYLIEMTNGGVDRAIECSGSIQAMTSAFECVHHGWGVAVLVGLPRKDDAFKTHPMNLLFSLTLKGTCYGNLKPRSDLPSTVEKYMKGELELEKFISHYVPFSEINKAFEYMLKGESIRCIICMQD 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0761 383 Gene3D - 182 324 - -
Prci5g0761 383 FunFam alcohol dehydrogenase 1-like isoform X1 15 181 - -
Prci5g0761 383 Pfam Alcohol dehydrogenase GroES-like domain 32 160 IPR013154 -
Prci5g0761 383 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 65 79 IPR002328 GO:0008270|GO:0016491
Prci5g0761 383 PANTHER ALCOHOL DEHYDROGENASE 9 379 - -
Prci5g0761 383 SUPERFAMILY GroES-like 331 379 IPR011032 -
Prci5g0761 383 FunFam Alcohol dehydrogenase class-P 182 324 - -
Prci5g0761 383 Gene3D - 16 373 - -
Prci5g0761 383 Pfam Zinc-binding dehydrogenase 205 335 IPR013149 -
Prci5g0761 383 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 346 IPR036291 -
Prci5g0761 383 CDD alcohol_DH_plants 9 379 - -
Prci5g0761 383 SUPERFAMILY GroES-like 8 185 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0761 Prci-Chr5 17649152 17652538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0761 33 373 Monolignol Biosynthesis Gene Families AT4G37990 22.832 7.56e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0761 K18857 - gmx:100801918 602.823