Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci5g0746 | ATGGATGGGAGAGAAGCTATGGCATTCTATGGTGGCTCAGCTTCATATTACATGCATAGAGGAAATGTTTCTGGGTCTGGCTCTGGAACACAGGCCCAGGGGTTCCAACAAACACCTCCTGGGTTTAGACCTTTGTCAAACGCTGGCTTTCAAGCTCAGTCAAATGTCCGAGGTGTTTCTGTGGGTTCTACATTTCCAGTGGAGCCTCCTCGTAGCAATTTTAGTCCAGGCATTAACATAAGTTCCTCTCCTGGAGTACATTCAGGTGAGCCCTTGAAAAAGAAGAGAGGAAGGCCGCGTAAATATGGTCCTGATGGCCCTGTTTCTTTGGGACTGTCTCCCATGTCTGCAACTGCTAATTCTGCGCCAGGTTCAGGCACACCTTCCCAGAAACGGAATAGAGGACGGCCACCTGGAACTGGCAGGAAGCAGCAGCTAGCGGCTCTAGGTGAATGGATGAACAGTTCAGCGGGACTTGCTTTTGCACCTCATGTTATCACCATTGGAGCTGGGGAGGACATTGTAGCAAAGTTGTTGTCTTTATCGCAGCAGAGACCAAGGGCTCTGTGCATCATGTCAGGCACTGGCACAGTTTCTTCAGTCACTCTACGCCAACCTGCTTCAGCAAACATCAGTCTCACTTACGAGGGCCGGTTTCAAATTTTATGCTTGTCTGGCTCATATTTGGTTTCTGAGGATGGCGGACCTTGTGATAGAACTGGTGGTTTGAGTGTTTCTCTTTCTAGCCCTGAGGGTCATGTTATTGGTGGTGGTGTTGCTGTGCTTATCGCTGCAAGCCCAGTGCAGGTGGTGGTGTGCAGTTTTGTATATGGAAGTGCTAAGATGAAGACAAAGCAAGTAACCTCTCCCAAGGGTGAGAAGAATTCTGAGCCTCAGACTCAAAATCCTCCTCAGGCTCAGGCTCAGCCTCTTCGTGATGGTAGTAACAAGTTCAGTAGCCCTATTACTCCTGCAAGTGCTCAAAACTACACATTGTCAGCATCATCAGCCATGTGGCCAGGAGACCTGAAAAGCTCACACACACACACTCGTACTGGTATTGACTTGACCCGAGGCTGA | 1080 | 0.4926 | MDGREAMAFYGGSASYYMHRGNVSGSGSGTQAQGFQQTPPGFRPLSNAGFQAQSNVRGVSVGSTFPVEPPRSNFSPGINISSSPGVHSGEPLKKKRGRPRKYGPDGPVSLGLSPMSATANSAPGSGTPSQKRNRGRPPGTGRKQQLAALGEWMNSSAGLAFAPHVITIGAGEDIVAKLLSLSQQRPRALCIMSGTGTVSSVTLRQPASANISLTYEGRFQILCLSGSYLVSEDGGPCDRTGGLSVSLSSPEGHVIGGGVAVLIAASPVQVVVCSFVYGSAKMKTKQVTSPKGEKNSEPQTQNPPQAQAQPLRDGSNKFSSPITPASAQNYTLSASSAMWPGDLKSSHTHTRTGIDLTRG | 359 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci5g0746 | 359 | MobiDBLite | consensus disorder prediction | 284 | 347 | - | - | |
| Prci5g0746 | 359 | ProSiteProfiles | PPC domain profile profile. | 155 | 297 | IPR005175 | - | |
| Prci5g0746 | 359 | MobiDBLite | consensus disorder prediction | 20 | 86 | - | - | |
| Prci5g0746 | 359 | MobiDBLite | consensus disorder prediction | 20 | 144 | - | - | |
| Prci5g0746 | 359 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 163 | 276 | IPR005175 | - | |
| Prci5g0746 | 359 | CDD | DUF296 | 163 | 275 | IPR005175 | - | |
| Prci5g0746 | 359 | Gene3D | - | 163 | 292 | - | - | |
| Prci5g0746 | 359 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 55 | 335 | IPR039605 | GO:0003680 | |
| Prci5g0746 | 359 | MobiDBLite | consensus disorder prediction | 113 | 134 | - | - | |
| Prci5g0746 | 359 | MobiDBLite | consensus disorder prediction | 284 | 359 | - | - | |
| Prci5g0746 | 359 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 161 | 281 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci5g0746 | Prci-Chr5 | 15159486 | 15164511 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci5g0746 | 1 | 359 | AT-hook Motif Nuclear Localized (AHL) Family | AT1G63470 | 51.015 | 1.79e-98 | 295 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci5g0746 | - | - | qsa:O6P43_034235 | 481.1 |