Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0745 CTTGCTACACAATGGCTTCTGCGATCTAGTGAGATTCTTCAGAATCCTTATTCAAGCGATGCTGTTGTTTCTGTGCTGAGGGAAGCTGAACAGTTTCTTTGGGCCGGTCCTGAGATGAATTCTGTTCGAGATATGGTGAAGAGTTTGATTGAAGCTCAGAAGTGGGCAGAAGGGATAAGAGATTGTTTAAGAAAAATTGAAGCCTGGTTGTGTGATCAGGACTTTGACAGAGAGAAAGTGCACCTAGAATTTGTTGATCAGCTGCTAACATTTAATTTTGCACCATGCAATGAGCCTGCTTATCATAAGTTGAAGGAATATACAGAAGGGGCTGTGTTGTTAAGTCAGGAGATTAATATTGCTTTGTCAAAGTGTTCAAAGATGTCTGAGTTGGAATCATTGCATTCTAGAGTTTGTGGCTATCCACTCTACGTGAAAGATGTTGAGAAGTTGGAAAGGAAAATTTCTTCAACTAAGGTGTGGCTGCAGAGAGCCAGAAGCTGCATCTCCATCAAACATCCTGCTGCAGTAGAGCTTGATGTTCTTTACAAGTTGAAGTCAGAGATTATGGAGCTTCAAGTACTGCTTCCAGAGATGGACGTGATTCAGAATATATTAAGTCAAGCAGAATCTTGTGGTTCAAAATGTAGTGAGATGTTAGAAGGTCCCATGAATCTAAAGAATGTCAAGATGCTTCTTAAGGAATGGGACGGCTTTATGGTTGATGTACCTGAGGTGAAGCTTTTGCGGAAATATTATAAGGATGCTGTTTCATGGGTTTCCAACTTTAACCATATTGTAGAGACAACACATGAACGGGAGGACCAACATAATGTCATCGATGAATTGAAGAGTATTTTAGGAGATGGTTTATCATTAAAAATTCATGTTGATGAGTTGCCATTGGTTGAGACTGAGCTGCAGAAAGCTCTTTGTCGGGAAAAGGCTCTACAGGCATATAAATCTAGGTTGTCTCTGGAATTTGTTCAGGAAGTGATGAAGGAGGCCAGACTGCTACAACTTGAGGGAGAGAAATTATTTGTTGGTTTATCTGGTTTACTTGCTGTTGCCATACCTTGGGAGGAAAGGGCTAAAGAGATTCTTTCACATAAGGCTTCCTTCTCTGACTTCAGGGACATCATCAGGGCCTCAGAGAGCATATTTATGATTCTTCCTTCCCTTGATGATATGAAGGCAGCACTGCTGGAAGCTAATTCATGGCTAATGAATTCAAAACAATTTTTGGTTTCTTCTACTTGTCCATCAGATTCTCCACTGAAAGTTGAGGAGCTTCAGATGTTGGTTTCTCAGTCAAAGCTTCTTAAAATATCTTTTGAAGAAGTGAGGATGCTTGAAATAGTTCTGCAAAACTGCAAAAAATGGGAGTGTGAGGCATGTTCTCTATTGGAAGATGCCCAGCATACTTTTGAATTGGATGACGTTGTTCATGGAATAAGCAGTGGCCTAATGTCCAAAGTTGAAGGTTTGATTGCCAGAATGCAGTCTAGCACAAAATCTGGTTTATCGCTTGGTTTTGACTTTGATGAGCTTCCCAAACTTAAAGCAACTTGTTCTACACTGCGTTGGTGCAAAAAGATTCTTTCCTTCTGCAATCTTTCTCCCTCTTTGGAGGATGTTTTGGAAGCTACAAAAGACTTTCCTCATTTGTGTGATTCTGGGGCCCTATTGAATATACTGATTCGTGGAGTCAAGTGGCTTAGGCAGGCCTTGGAAGTAATTTCTGGATCACACAATTCTAGAAGAAGCAAGTCAGGCGAAGTTGACAATATTATTAGAGATTACCAGACTATTAATATTCCTTTTGCAGCAATAGTCTACCAACTTGAAGAAGCCATTGGAAAACATAAAATGTGGCAAGAACAGGCACATCAATTCCTTAGCCTTTGTTCTGGGAAACGGTCTTGGGTATCAATGTTGAAACTCAAGGAATTAGGTGATAAGGTTGCCTTCACCTGCAGAGAACTAGATTTGATATCATCTGAAGTTGAGAAAGTGGAGAATTGGAAGAAACACTGCATGAATTTTGTAGGAACTTTAGTCCAAAATGAGAATTCACTGCTTGATGTTCTGCAGAAGATGAAACAGAGTTTAGATAGATCATTGTTCATATATGGCAAGTTGAAAGACTGCAAGGACGAATGTTTATGCATCTACTGCTTTACTGATTTTGAGGATCAGGAATATCTTACTTGCTCCACTTGTGGAAACTGCTATCATACGCTATGCATTAGACCTTTGGTGGACAATAGCCATGAAGATTATACGTGCTCTTCCTGTAAAATTTTGAAGGGTGAATCCAATTATAAGAAGGGAACTCTCCCTGTGGGGTTTGGTGTGAAGCGTGCTGACAAAGTTCTTCTTGAACTTCTTTCTGATGCTAAAAATTTGTGTGTAAGGATTGATGAGACAGATGCTCTCAACCAACTTGTTGAGCAAGCGCTTCTATGCAGATCTTGCTTGCGAGACATAGTGAACTTCACATCTGCTGATGTAGACAATGATCTTAGCACCATCTCTGAAAAATTGACCATAGCTATAAAGGCCTGTGAAGTTGCTGGCGTCTCTGATCAGCAAGATTTACACAACTTTGAGTTGGCTTTAGCAAGACACCTTTGGAAAATTCGAGTCAATAGAATGCTAAATAGTTTACAAAATCCTTCTATCCAAGAGATTCAGAAGCATCTGAAAGAG 2712 0.4001 MASRQYPQYVGTEEDPSCIICQQYLYLSAVVCSCRPSSFVCLEHWEHLCECKTVKLRLLYRHSLAELHDLGLSVDNYTSDDKALFRNIRKHSSCPGTLTKKLATQWLLRSSEILQNPYSSDAVVSVLREAEQFLWAGPEMNSVRDMVKSLIEAQKWAEGIRDCLRKIEAWLCDQDFDREKVHLEFVDQLLTFNFAPCNEPAYHKLKEYTEGAVLLSQEINIALSKCSKMSELESLHSRVCGYPLYVKDVEKLERKISSTKVWLQRARSCISIKHPAAVELDVLYKLKSEIMELQVLLPEMDVIQNILSQAESCGSKCSEMLEGPMNLKNVKMLLKEWDGFMVDVPEVKLLRKYYKDAVSWVSNFNHIVETTHEREDQHNVIDELKSILGDGLSLKIHVDELPLVETELQKALCREKALQAYKSRLSLEFVQEVMKEARLLQLEGEKLFVGLSGLLAVAIPWEERAKEILSHKASFSDFRDIIRASESIFMILPSLDDMKAALLEANSWLMNSKQFLVSSTCPSDSPLKVEELQMLVSQSKLLKISFEEVRMLEIVLQNCKKWECEACSLLEDAQHTFELDDVVHGISSGLMSKVEGLIARMQSSTKSGLSLGFDFDELPKLKATCSTLRWCKKILSFCNLSPSLEDVLEATKDFPHLCDSGALLNILIRGVKWLRQALEVISGSHNSRRSKSGEVDNIIRDYQTINIPFAAIVYQLEEAIGKHKMWQEQAHQFLSLCSGKRSWVSMLKLKELGDKVAFTCRELDLISSEVEKVENWKKHCMNFVGTLVQNENSLLDVLQKMKQSLDRSLFIYGKLKDCKDECLCIYCFTDFEDQEYLTCSTCGNCYHTLCIRPLVDNSHEDYTCSSCKILKGESNYKKGTLPVGFGVKRADKVLLELLSDAKNLCVRIDETDALNQLVEQALLCRSCLRDIVNFTSADVDNDLSTISEKLTIAIKACEVAGVSDQQDLHNFELALARHLWKIRVNRMLNSLQNPSIQEIQKHLKEGLAMEISPEDRYMLQLSKVNCLYLQWAELTKKVAVDSGAFSLDKVFKLIAEGEKLPVNVDEDLRILMARSMLYCICRKPFDPGRMIACNQCGEWYHFDCMKLPYSEEFYTCPACNPSTAGMATSLDHERLTSGKLEEPKTPSPRHTNPRKKQKMDEASVSHKMCGSEDHIEDNDCSYSRGIECLRWQNRKPFRRAAKKRVDFRRHSSFLCIHSNN 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0745 1220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1068 1136 IPR013083 -
Prci5g0745 1220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 758 873 IPR013083 -
Prci5g0745 1220 Pfam PLU-1-like protein 505 779 IPR013637 -
Prci5g0745 1220 Pfam PLU-1-like protein 420 566 IPR013637 -
Prci5g0745 1220 Pfam PLU-1-like protein 125 411 IPR013637 -
Prci5g0745 1220 PANTHER CXXC-TYPE ZINC FINGER PROTEIN 1 912 1171 IPR037869 GO:0048188
Prci5g0745 1220 SUPERFAMILY FYVE/PHD zinc finger 814 870 IPR011011 -
Prci5g0745 1220 SUPERFAMILY FYVE/PHD zinc finger 1073 1123 IPR011011 -
Prci5g0745 1220 MobiDBLite consensus disorder prediction 1135 1163 - -
Prci5g0745 1220 Pfam PHD-finger 1078 1121 IPR019787 -
Prci5g0745 1220 ProSiteProfiles Zinc finger RING-type profile. 824 868 IPR001841 -
Prci5g0745 1220 ProSitePatterns Zinc finger PHD-type signature. 1079 1119 IPR019786 -
Prci5g0745 1220 SMART PHD_3 823 868 IPR001965 -
Prci5g0745 1220 SMART PHD_3 1078 1120 IPR001965 -
Prci5g0745 1220 Pfam C5HC2 zinc finger 18 69 IPR004198 -
Prci5g0745 1220 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0745 18 68 JUMONJI Transcription Factor Family AT2G38950 43.137 1.65e-06 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Prci5g0745 PLU-1 6.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0745 K11446 - gmx:100789512 1563.13