Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0720 ATGGGCAAGGCATCAAAATGGTTTCGCTCTGTTTTTGGTCTGAAGAATTCAGACTCCTCGTTTTCGCCGTCTCCGTCGACTATACCCCCTGGCTCAGCTTCAAAACCTCTCAAAGATAAACGCAGGTGGAGCTTCGTCAAGTCTTACAGGGAATCCGGCGGTACCAAAGCCTCCGACCACCTCACTACGTTCAGAGAGGAAGCGGTTACACCGTCCGGACACATCGACAGCTTGCGTCCTGATAAGCACGCAATGACGGTGGCTGCTGCCAAGTCTGCGGTTGTGGAAGCGGCAGTGGATGCTGCTCAGGCCGCCGCCGCCGCCGCCGCCGTTGTCAGGCTCACGAGCAGCGGAAGGTGCTCTGGAAGCATCGGGACTCGTGAGGAATGGGCAGCCATCAAGATTCAAGCCGCTTTTCGGGGCTGTTTGGAAGCGAGCATTAAAAGGATTAAAAGGAGAGCACTGCGAGCATTAAAAGGATTGGTAAAGCTTCAGGCATTGGTGAGAGGTGATATTGATAGGAAGCGAACAGCAGAGTGGTTGCATAGACTACATGCAGTTGTTCGAGTACAGCCGCGTGTCCGTGCAGGACGAACCCAAATTCTACAGACGCCATTTTCAAATTCTAAGTCATCTAAACCAGACTTCCATGTTCCAGCTACACCAGACAAATTTGAAAGCCCGATCAGATCCAAGAGCATGAAATTTGATCATTCTTCATCACTCAAGAGAAATGTGTCCAAATCCCATGTTCAGATCCATGGGAATCAAGAGAAATGTTGGGATGATGCAAAAAGCTACAAGATTCTTGAGATTGATTCTGGAAAACTGCACTTCCCGCCAAAACGCCGAAACCTCTTTCACTCCATTAACTATCCTTCAGTATGTGATAATTACAGCCAAAGTTTCTCTACTGCAAAGGACTCAAAAAGTCATCAGTCAGGCCAGAGCACGTCTTCGGTTGACGAAGGCGTTGTGGATAGTTCTCAGCTTTTTTCTGTCTTCTCAAGGAACTCCGTCCTCAAAAGTAGTCCTTTTACTCCTAGCAGAAGAGACGACTCAAGAAGCTATCTGAGTTCTCATTCAGACTACCCAAGCTACATGGCTTACACTGAATCTTCTAAGGCAAAAGTCAGATCTCTGAGTGCTCCAAAACAAAGGCCTCGATATGAGAGGTCTAGTTCATCCAATAGGTACTCTGTTCAAGGATTGACCACCCAAAAAGCAAATGCATTGCACGCGAACTTCACGAGCAAAGCGTATCCAGGTTCTGGTCGTCTGGACAAGGATGGTATGCCAGTGGGGTATAGATGCTAA 1317 0.4822 MGKASKWFRSVFGLKNSDSSFSPSPSTIPPGSASKPLKDKRRWSFVKSYRESGGTKASDHLTTFREEAVTPSGHIDSLRPDKHAMTVAAAKSAVVEAAVDAAQAAAAAAAVVRLTSSGRCSGSIGTREEWAAIKIQAAFRGCLEASIKRIKRRALRALKGLVKLQALVRGDIDRKRTAEWLHRLHAVVRVQPRVRAGRTQILQTPFSNSKSSKPDFHVPATPDKFESPIRSKSMKFDHSSSLKRNVSKSHVQIHGNQEKCWDDAKSYKILEIDSGKLHFPPKRRNLFHSINYPSVCDNYSQSFSTAKDSKSHQSGQSTSSVDEGVVDSSQLFSVFSRNSVLKSSPFTPSRRDDSRSYLSSHSDYPSYMAYTESSKAKVRSLSAPKQRPRYERSSSSNRYSVQGLTTQKANALHANFTSKAYPGSGRLDKDGMPVGYRC 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0720 438 MobiDBLite consensus disorder prediction 205 228 - -
Prci5g0720 438 Pfam IQ calmodulin-binding motif 130 143 IPR000048 GO:0005515
Prci5g0720 438 MobiDBLite consensus disorder prediction 387 401 - -
Prci5g0720 438 Gene3D - 126 187 - -
Prci5g0720 438 ProSiteProfiles IQ motif profile. 159 186 IPR000048 GO:0005515
Prci5g0720 438 ProSiteProfiles IQ motif profile. 128 157 IPR000048 GO:0005515
Prci5g0720 438 MobiDBLite consensus disorder prediction 378 401 - -
Prci5g0720 438 PANTHER IQ-DOMAIN 5-RELATED 1 402 - -
Prci5g0720 438 MobiDBLite consensus disorder prediction 14 39 - -
Prci5g0720 438 Pfam Protein of unknown function (DUF4005) 347 403 IPR025064 -
Prci5g0720 438 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0720 Prci-Chr5 13619862 13624371 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0720 1 437 IQD Protein Family AT4G23060 40.631 5.60e-59 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0720 - - pcin:129310994 768.844