Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0708 ATGGATTCAAATCCTTGTGACTGGAATGGCGTTTCCTGCAATCCGGTTGGAGACCATGTTGTTAAGCTAAACATTTCGAGATCATCATTAAAGGGGTTTCTAGCACCAGAATTGGGACGAATCACGTACTTGGAAGAATTGATTTTGCATGGCAATAAACTGATTGGAACAATACCTAAAGAGTTGGGGATGTTGAAATCTCTTAAGGTCCTGGATTTGGGGATGAATCGTCTATTAGGACCAATTCCTCCAGAGATTGGAACTTCAACCCAATTAATGAAAATAAATTTGCAGTCCAACGGGTTGACTGGTAGACTGCCCCCAGATCTTGGAAATTTGAAATACCTTCAAGAACTGAGGCTGGATAGGAATAAGCTTCAAGGACCTGTTCCTGCTGACAGCAGTTCCGATTTTCCTTCAAATATGCGTGGCATGTATGCATCAAATGCGAATTTAACTGGTTTCTGTCGTTCGTCTAAGTTAAAAGTTGCAGATTTTTCCTATAACTTCTTTGTTGGTAGCATCCCAAAATGCTTGGAATATCTTCCAAGGTCCAGCTTTCAAGGGAATTGCCTCCAGATCAAAGATTCAAGGCAACGCCCTTCTATGCAATGTGCTGGTGCTTCACCTGCCAGGGGCCACCCCGTGATCAACCGAAAGCACCGATCAGCTGATTATTTATCCAAGCGTCAAGGAGCACCAAAACCGGCTTGGCTTTTGGCTCTAGAAATAGTGACAGGGACCACGGTTGGTTCTCTCTTTTTAGTTGCTGTCCTAACTGCTCTTCAAAGGTTTAACAGCAAATCATCTATCATTATTCCTTGGAAGAAATCTGCAAGTGAGAAGGAGCAGCGTATGACAGTATATATAGACTCTGAGATGTTGAAAGATGTAAGGAAGTATAGCAGACAAGAGCTCGAAGTGGCTTGCGAAGATTTCAGCAACATCATTGGGTCCTCGCCTGACAGTGTGGTATACAAGGGCACCATGAATGGTGGGCCTGAAATTGCCGTAATTTCCCTCTGCATTAAGGGAAATTGGACAGGATACCTCGAGCTCTATTTTCAGCGGGAGGTGGCAGACTTGGCGAGGCTAAATCATGAGAATATAGGAAAACTACTAGGATATTGTAGACAGAGCACTCCATTTACAAGGATGCTGGTTTTTGAATATGCTTCAAATGGGACGCTTTCTGAGCACATACATTATGGAGAAGGATGCCAGTTATCATGGACAAGGCGTATGAATATTGCCATTGGTATTGCACGAGGTCTCAAATATCTGCACTCAGAAGTTGAGCCTCCATTTACTATACCGGAGCTTAATTCTGGTTCTGTATACCTAACAGAAGATTTTGCCCCAAAGCTGGTTGATTTTGAAAGCTGGAAGACAATTTTGGAAAGATCAGAAAGGAATTCTGGTTCTGTTAGCAGCCAAGGTGCCGTTCGTGTTTTACGAAATTCCATCGAGGCACGCCATCTTGATACCCAAGGAAACATATATGCTTTTGGGGTGCTCCTACTTGAGATAATCAGCGCAAGATCTCCCAATTGCAAGGACAAGAGTTACTTGGTGGCCTGGGCGAAGGACTATCTTGAAAATCCAGAAGAAATGCCATCTTTGGTGGATCCGGAACTGAAACATTTTAGGGACGAAGACCTTAAAGTGATATGTGAGGTAATAAATCTCTGTATCAATTCTGACCCCGCAAGGCGTCCAGGGATGCAAGAGTTGTGTAGTATTCTGGAGAGAAGAATCGACACATCCATAACTTCGGAGCTCAAGGCATCATCTTTGGCTTGGGCCGAACTTGCACTCTCATCTTGA 1827 0.4362 MDSNPCDWNGVSCNPVGDHVVKLNISRSSLKGFLAPELGRITYLEELILHGNKLIGTIPKELGMLKSLKVLDLGMNRLLGPIPPEIGTSTQLMKINLQSNGLTGRLPPDLGNLKYLQELRLDRNKLQGPVPADSSSDFPSNMRGMYASNANLTGFCRSSKLKVADFSYNFFVGSIPKCLEYLPRSSFQGNCLQIKDSRQRPSMQCAGASPARGHPVINRKHRSADYLSKRQGAPKPAWLLALEIVTGTTVGSLFLVAVLTALQRFNSKSSIIIPWKKSASEKEQRMTVYIDSEMLKDVRKYSRQELEVACEDFSNIIGSSPDSVVYKGTMNGGPEIAVISLCIKEXNWTGYLELYFQREVADLARLNHENIGKLLGYCRQSTPFTRMLVFEYASNGTLSEHIHYGEGCQLSWTRRMNIAIGIARGLKYLHSEVEPPFTIPELNSGSVYLTEDFAPKLVDFESWKTILERSERNSGSVSSQGAVRVLRNSIEARHLDTQGNIYAFGVLLLEIISARSPNCKDKSYLVAWAKDYLENPEEMPSLVDPELKHFRDEDLKVICEVINLCINSDPARRPGMQELCSILERRIDTSITSELKASSLAWAELALSS 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0708 609 Gene3D Phosphorylase Kinase; domain 1 282 392 - -
Prci5g0708 609 Gene3D Transferase(Phosphotransferase) domain 1 393 599 - -
Prci5g0708 609 FunFam Nuclear pore complex protein NUP107 1 132 - -
Prci5g0708 609 FunFam Inactive receptor-like serine/threonine-protein kinase 285 392 - -
Prci5g0708 609 Pfam Protein tyrosine and serine/threonine kinase 315 582 IPR001245 GO:0004672|GO:0006468
Prci5g0708 609 Gene3D Ribonuclease Inhibitor 1 203 IPR032675 -
Prci5g0708 609 PANTHER PROTEIN MALE DISCOVERER 2 2 607 - -
Prci5g0708 609 SUPERFAMILY Protein kinase-like (PK-like) 288 584 IPR011009 -
Prci5g0708 609 SUPERFAMILY L domain-like 3 183 - -
Prci5g0708 609 ProSiteProfiles Protein kinase domain profile. 311 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0708 Prci-Chr5 12637619 12642151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0708 4 588 Receptor kinase-like Gene Family AT5G45780 28.926 8.85e-56 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Prci5g0708 PK_Tyr_Ser-Thr 4.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0708 - - pcin:129310704 1184.09