Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0707 ATGTTGGCTGGGTGTTCTAGTTCTACATTGTTGTCGCCGAGGCATAGATTGAGGAGTGAAGCATCTGCACAGTTTCAAGCCAGCCATTTCCAGTTGCCTTCCATGAGCACGCAGAGACTGGACTTGCCATGTAACTTCCCACGCAAAGACAGCAACAGCTCGAGATCGCAGTCCTTGAGGCCCGTCGGCCTCTCCGTCGAGAAGAAGCCTGTCGTCGTCGAGTCCAAGCCGAAGCCTCCGCCGACATGCTCTCTCAAGCAGAACATTCGACTTCCGCCATTGGCAACCACCACTCAAGCATCCAATAATGCTCAGAAGAACAACGAGTTCTGGGGGGAGAAAGGTAAGACCTTGAAGAGGCTTGCTGAGGAGGATGAATCCTTCGCCAACAGAGCCAAGAGGACAAAGGGTATTCTCAATGACAGTGAAAATCCCGATGATGCTCGAGAAATCCAAATGGCATCTGCCGGCAACTTCTGGTTCAACAATCCTTCGATTCCTTTCTCTCTGACTTGTTCCGGAGAAAAAGAAGAAGACAGGGTGTGTTTTGTTCCTTCTGAAGTTGTCTCTGCACCATGGGTGGATTCCATTGTTACGAAGATCACAGATTTAGGCGAGAAAGCGTTGAAGAGCAATCTGCCATCAAAGGAAGCTTCAGTATCGAACACTTCATCAGAAAGTCGGAGCTTGAGCCTGAGGCTTAACGAGAATGACTCGGAACAAGAAGTAGTGGGTAATGGAAGATCGGGCAATCCTTATCACCACGATGTGACGGAATTAGAAACAGGAGACGAAGAAAATCAAGAGGAACATCGAGGGTTTGAGCTTGTGAGCCTACTTACAGCTTGTGTTGATGCTATCGGTTCGAGGAATGTTGCTGCAGTGCATTGCTTCATAGCGAAGTTGGGTGATCTTGCATCTCCAAGAGCAAGAACATCAATAGGTCGTGTGTGTGCTTATTTCACTGAAGCTCTAGCGATCCGTGTCACCAGAATTTGGCCTCATTTTCACGTCACTACACCTCGAGAGCTAGACAGGGTCGAAGATGAATCTGGAACTGCATTAAGGCTTCTAAACCAGGTCAGCCATCCAAAGTTTCTTCATTTCACGTCTAATGAGATTCTTTTGAGGGCTTTTGAAGGAAAAGACAGGGTTCACATCATAGACTTTGACATCAAGCAAGGCCTTCAATGGCCAAGCTTGTTCCAGAGTCTAGCTTCCAGGACCAATCCTCCAACCCACGTAAGAATCACTGGCATAGGAGAATCCAAGCAAGAACTGAACGAAACAGGAGACAGACTTGCTGGTTTTGCTCAATCCCTGAACCTTCCCTTCGAGTTTCACCCTGTGGTGGACAGACTAGAAGATGTGAGGCTATGGATGCTTCATGTGAAGGAACACGAAAGTGTGGCAGTGAATTGCATTTCTCAACTCCACAAAACACTCTACGATGGTACTGGAGGAGCACTGAGGGATTTTCTAGGTCTAATCCGAAGCACGAATCCTGTTATAGTTCTCATGGCAGAGCAAGAAGCAGAGCACAATGGGATTAGACTTGAAACGAGAGTGTGCAATTCACTCAAGTATTACTCTGCTCTGTTTGATTCAATTGACCATTGTCTTCCACAAGACAGTCCAGTGAGGAACAAGATTGAAGAGATGTATGCTTGGGAGATAAGGAACATCATTGCTTGTGAAGGAAGGGAGAGAGTTGAGAGGCACGAGAGCTTTCAGAAATGGAGGAAGATGATGGAGCAAGGAGGATTTCGAAGTTTGGGAATCAGTGAGAGAGAAGTGACACAGAGTCAGATGTTGCTGAAGATGTATGCCTGTGAGAATTACAACGTGAAGATGGAGGTGGAGGAGGAGGAAGAAGAAGCTATAACTCTTAGTTGGCTTGAGCAGCCTCTGTACACAGTGTCGGCATGGGCCCCACTAGATGCTGCAGCAACAGGAAGTCCATCTTCTTATTCGCAGCCATGA 1983 0.473 MLAGCSSSTLLSPRHRLRSEASAQFQASHFQLPSMSTQRLDLPCNFPRKDSNSSRSQSLRPVGLSVEKKPVVVESKPKPPPTCSLKQNIRLPPLATTTQASNNAQKNNEFWGEKGKTLKRLAEEDESFANRAKRTKGILNDSENPDDAREIQMASAGNFWFNNPSIPFSLTCSGEKEEDRVCFVPSEVVSAPWVDSIVTKITDLGEKALKSNLPSKEASVSNTSSESRSLSLRLNENDSEQEVVGNGRSGNPYHHDVTELETGDEENQEEHRGFELVSLLTACVDAIGSRNVAAVHCFIAKLGDLASPRARTSIGRVCAYFTEALAIRVTRIWPHXFHVTTPRELDRVEDESGTALRLLNQVSPXPKFLHFTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPTHVRITGIGESKQELNETGDRLAGFAQSLNLPFEFHPVVDRLEDVRLWMLHVKEHESVAVNCISQLHKTLYDGTGGALRDFLGLIRSTNPVIVLMAEQEAEHNGIRLETRVCNSLKYYSALFDSIDHCLPQDSPVRNKIEEMYAWEIRNIIACEGRERVERHESFQKWRKMMEQGGFRSLGISEREVTQSQMLLKMYACENYNVKMEVEEEEEEAITLSWLEQPLYTVSAWAPLDAAATGSPSSYSQP 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0707 662 MobiDBLite consensus disorder prediction 41 61 - -
Prci5g0707 662 MobiDBLite consensus disorder prediction 215 246 - -
Prci5g0707 662 MobiDBLite consensus disorder prediction 215 257 - -
Prci5g0707 662 Pfam GRAS domain family 276 645 IPR005202 -
Prci5g0707 662 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 223 641 IPR005202 -
Prci5g0707 662 MobiDBLite consensus disorder prediction 41 63 - -
Prci5g0707 662 ProSiteProfiles GRAS family profile. 267 646 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0707 Prci-Chr5 12340727 12343996 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0707 1 645 GRAS Transcription Factor Family AT1G63100 57.918 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci5g0707 GRAS 4.8e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0707 - - cave:132174862 882.863