Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0705 ATGATGATTGATTTGTTAGCGTTGTTACCATTTGAGACTGATGGCCAAAACGCAAATGCTAGAACCCAGATTTCTGAGTGCGAACACACTTTCTTACCTTCAAACAAACGTCTTCTTTCATGCTCCAAGAGGCACCCTCTGCTCCATGGAATCCGGTGCCGTGGAGAAAAGTGGGTGTCGGAGATCCGGGAGCCACGAAAGCCGTCTATTATATGGCCCGGTACGTTCGCGTCGCCGGAGATGGCAGTGGTCGCTTATGATGTGGCGGTGTTAGCCTTGAAAGGCAAGGATGCTGTTCTCAACTGGCCTGAGTTGGCCGAAAGGTATCCGGTGCCGGTTTCCACCTCCGCTCCACATATCCGCCAGGCCGCGGCGGCGTCGGCTTCGCTGGTGAACGCTGAACCCATTTCCAACGTCATCAGCAACATCTCATCAATCTCGTCAACTTGGTCTGGAACGGTTCATCAATTTGTGGACGAGGATGCTATTTTCGGCACGCCTGGTTTGCTCTTAGACATGGCAGAAGGAATGTTGTTGTCCCCTCCAAGAATCACACCCCCATCTTCTGACAACTTGCCTGCAGATTGTTTGTGGAACTACTTTTAA 606 0.5132 MMIDLLALLPFETDGQNANARTQISECEHTFLPSNKRLLSCSKRHPLLHGIRCRGEKWVSEIREPRKPSIIWPGTFASPEMAVVAYDVAVLALKGKDAVLNWPELAERYPVPVSTSAPHIRQAAAASASLVNAEPISNVISNISSISSTWSGTVHQFVDEDAIFGTPGLLLDMAEGMLLSPPRITPPSSDNLPADCLWNYF 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0705 201 ProSiteProfiles AP2/ERF domain profile. 35 103 IPR001471 GO:0003700|GO:0006355
Prci5g0705 201 Gene3D AP2/ERF domain 49 104 IPR036955 GO:0003700|GO:0006355
Prci5g0705 201 SMART rav1_2 47 109 IPR001471 GO:0003700|GO:0006355
Prci5g0705 201 SUPERFAMILY DNA-binding domain 51 103 IPR016177 GO:0003677
Prci5g0705 201 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 42 188 IPR045277 GO:0003700
Prci5g0705 201 CDD AP2 57 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0705 Prci-Chr5 12061465 12062315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0705 44 200 AP2-EREBP Transcription Factor Family AT2G36450 46.821 6.18e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0705 - - pcin:129310751 384.03