Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0703 ATGGATTTTTTCAGACAAGACACATCCGATGCTTCTTCTTCAGAGGGAAGCTCGTTGAGCGGCGACGAGCAGATGTTGTTATTGGCGTCGGAGAGACCCAAGAAGCGAGCGGGACGGAGGGTTTTCAGGGAGACGAGGCATTCCGTGTACAGAGGAGTGCGACGGAGGCACAACGACAAGTGGGTTTGCGAGGTTCGTGTGCCGAATGATAAGACGAGGATTCGGCTTGGAACATATTCCACGGCGGAGATGGTCGCTCGTGCTCATGACGTGGCGGCGCTAGCTCTTCGTGGGAAGTCGGCTTGCCTTAATTTCGCCGACTGGTCTTGGCGTTTGCCTCTGCCAGAATCAACCAATGCGGCGGAGATTAGGCGAGTGGCCGCTCTCACTGCTCAGGAATTCGGTCGGAGTAGTAGTGCTGATGATGTTGAATTTTGCATCAGTTGCAGCAGTGCGACGGTTGACGACGAAACCATCGTAGATGCGTCGCCGTGGAATGCCATGCAGGATTACTGTGAAGAAGAAGCGATATACATGCATCAAACTCCGGCGGCGTCAACGGAGTTTGACGAGCTCCGTCATTTGTTGATGAGCATGGCGGAGTAG 606 0.5413 MDFFRQDTSDASSSEGSSLSGDEQMLLLASERPKKRAGRRVFRETRHSVYRGVRRRHNDKWVCEVRVPNDKTRIRLGTYSTAEMVARAHDVAALALRGKSACLNFADWSWRLPLPESTNAAEIRRVAALTAQEFGRSSSADDVEFCISCSSATVDDETIVDASPWNAMQDYCEEEAIYMHQTPAASTEFDELRHLLMSMAE 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0703 201 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Prci5g0703 201 Gene3D AP2/ERF domain 49 107 IPR036955 GO:0003700|GO:0006355
Prci5g0703 201 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Prci5g0703 201 PRINTS Ethylene responsive element binding protein signature 88 108 IPR001471 GO:0003700|GO:0006355
Prci5g0703 201 CDD AP2 48 107 IPR001471 GO:0003700|GO:0006355
Prci5g0703 201 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Prci5g0703 201 SUPERFAMILY DNA-binding domain 48 107 IPR016177 GO:0003677
Prci5g0703 201 MobiDBLite consensus disorder prediction 1 23 - -
Prci5g0703 201 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 9 180 IPR045277 GO:0003700
Prci5g0703 201 Pfam AP2 domain 48 98 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0703 Prci-Chr5 11814163 11815553 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0703 26 155 AP2-EREBP Transcription Factor Family AT1G12610 62.308 2.50e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci5g0703 AP2 1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0703 - - pcin:129312011 392.119