Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0700 ATGGATTTTTTCAGACAAAACACATTCGATTCTTCTTCAGAGGGAAGTTTGTCGAGTGGTGGCGAGCCGATGTTGTTATTGGCGTCGGAGAGACCCAAGAAGCGAGCGGGACGGAGGGTTTTCAGGGAGACGAGGCATCCCGTGTACAGAGGAGTACGAAGGAGGAACAACGACAAGTGGGTTTGCGAGGTTCGTGTGCCGAATGATAAGACAAGAATTTGGCTCGGAACATATTCCACGGCGGAGATGGCCGCTCGTGCTCATGACGTGGCGGCACTGGCTCTTCGTGGGAAGTCGGCTTGCCTTAATTTCGCTGACTCGTCTTGGAGGTTGACTCTGCCGGAATCAACCAATGCGGCGGAGATTAGGAGCGTGGCCGCTCTCGCTGCTCAGGAATTCGGCCGGAGTAGCAATAGTGATGATGTTGAAGTTTGCAGCAGTCGCGGTAGTACAACGGTCGACGACGAAGTCATCGGAGATGCGTCGCCGTCGAATATTTTGCAGGATTACTGTGAAGAAGAAGAGAGGTACATCGATCAAACTCCGGAGGCGTCGACGGAGTTTGACGAGCTCCGTCATTTGTTGTTGAATATGGCGGAGGAACCTCTCCGATCGCCACCCTCTTTTAGACCATATGGTTGGAGCTGGAATGACGTGGAGGTTGATACTGAGGTCTCACTGTGGCAGTATTGA 693 0.5267 MDFFRQNTFDSSSEGSLSSGGEPMLLLASERPKKRAGRRVFRETRHPVYRGVRRRNNDKWVCEVRVPNDKTRIWLGTYSTAEMAARAHDVAALALRGKSACLNFADSSWRLTLPESTNAAEIRSVAALAAQEFGRSSNSDDVEVCSSRGSTTVDDEVIGDASPSNILQDYCEEEERYIDQTPEASTEFDELRHLLLNMAEEPLRSPPSFRPYGWSWNDVEVDTEVSLWQY 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0700 230 FunFam Ethylene-responsive transcription factor 2 47 106 - -
Prci5g0700 230 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 11 230 IPR045277 GO:0003700
Prci5g0700 230 Pfam AP2 domain 47 97 IPR001471 GO:0003700|GO:0006355
Prci5g0700 230 SUPERFAMILY DNA-binding domain 48 107 IPR016177 GO:0003677
Prci5g0700 230 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Prci5g0700 230 Gene3D AP2/ERF domain 48 106 IPR036955 GO:0003700|GO:0006355
Prci5g0700 230 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Prci5g0700 230 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Prci5g0700 230 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Prci5g0700 230 CDD AP2 49 107 IPR001471 GO:0003700|GO:0006355
Prci5g0700 230 MobiDBLite consensus disorder prediction 1 23 - -
Prci5g0700 230 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0700 Prci-Chr5 11674397 11675441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0700 9 230 AP2-EREBP Transcription Factor Family AT4G25470 50.885 6.94e-62 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci5g0700 AP2 1.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0700 - - pcin:129312011 310.842