Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0688 ATGACTCATTTCGGTTTTGGCGAAACACTATCTTTTGGAGGTTCAAACCATGGATTGGGCCACCTAGTTGTTCCGTTTCAAACCACTACGAGTTCCCTGAGGGTCTTGCTTCTGCATGGAAACTTGGATATATGCGTAAAAGGGGCTAGAAACCTGCCCAATTTAGATATGTTCCATCAGAAAATGGGGGATATGTTTTCCAGATTACCTGGAAAACTTGGCCAAAAAATTCAAGGGCATGTGTCCAACACAATCATTACTAGTGATCCTTACGTGACTGTATCTCTGGTGGGTGCTGTAATTGCAAGGACATTTGTAATCAAGAACGATGAGAACCCTATCTGGATGCAGCATTTCTATGTTCCTGTAGCACATCATGCTGCAGAAGTACACTTTGTGGTAAAGGAGAGCGATATTGTGGGTTCACAAATCATGGGTGCGGTTGGAATTCCAGTGGAACAGTTATACAAAGGCGCAAAAGTTGAAGGGTCATTTCCAATCCTTAATTCTAGTGGGAAACCTTGCAAAGATGGAGCAGTCTTGAGTTTATCCATTCAATACATTCCTTTTGATAAGGTGGCTCTTTATGGTCATGGTATAGGGACAGGTCCTAGCTATGAGGGGGTTCCAGGTACGTACTTTCCCCTTAGGAATGGGGGTCGAGTTAGACTTTATCAAGATGCTCATGTTCATGGAGGTTCCCTTCTTCCTAATTTGAAGATCGAAGGTGGTGTGAATTATGAGCATGGCAATTGCTGGCATGACATCTTTGATGCAATAAGTCAGGCCCAACGATTAGTATACATTGTGGGGTGGTCTGTATACTACAATGTTAGACTGGTTCGAGATACTGATGATGCTAAAGCTTGTACATTAGGTGATCTTCTCAAAATCAAATCCCAAGAAGGTGCGAGAGTTCTGCTACTTGTGTGGGACGATCCTACTTCTAGAAGCATGCTTGGTGGATATAAAACGGACTATGCAGTGATCAGGGCAAGGGAAGTGAGTCTGGACTAG 1017 0.4336 MTHFGFGETLSFGGSNHGLGHLVVPFQTTTSSLRVLLLHGNLDICVKGARNLPNLDMFHQKMGDMFSRLPGKLGQKIQGHVSNTIITSDPYVTVSLVGAVIARTFVIKNDENPIWMQHFYVPVAHHAAEVHFVVKESDIVGSQIMGAVGIPVEQLYKGAKVEGSFPILNSSGKPCKDGAVLSLSIQYIPFDKVALYGHGIGTGPSYEGVPGTYFPLRNGGRVRLYQDAHVHGGSLLPNLKIEGGVNYEHGNCWHDIFDAISQAQRLVYIVGWSVYYNVRLVRDTDDAKACTLGDLLKIKSQEGARVLLLVWDDPTSRSMLGGYKTDYAVIRAREVSLD 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0688 338 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 33 190 IPR035892 -
Prci5g0688 338 Gene3D C2 domain 38 194 IPR035892 -
Prci5g0688 338 SMART C2_3c 41 164 IPR000008 -
Prci5g0688 338 Pfam C2 domain 40 167 IPR000008 -
Prci5g0688 338 SUPERFAMILY Phospholipase D/nuclease 215 317 - -
Prci5g0688 338 ProSiteProfiles C2 domain profile. 18 165 IPR000008 -
Prci5g0688 338 PANTHER PHOSPHOLIPASE D 32 320 IPR015679 -
Prci5g0688 338 CDD C2_plant_PLD 35 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0688 Prci-Chr5 10993143 10999111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0688 32 326 Phospholipase D Gene Family (Wang group) AT2G42010 68.581 4.39e-143 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0688 K01115 - pcin:129312026 686.026