Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0645 ATGGACCAAATTACAGCGCATCCTCATTCTCTTCCTCCTCCATTCCACACGAGGGATCTTCATCATCCACACCATCAATTTCACTCTCTCCATCAAAACACAGAAGACGAGCAGAGCGGAAGCAGCGGCGGCCTCAACCTTGCTCAGAAAAGGGATCGAGAAGAAAACAGCAACAGCGAGGGAAAGGAGATGGTGGCCGTGGGCTCCGGCGATGCCGAGATCACGAGAAGACCGCGAGGAAGGCCCGCCGGCTCCAAGAACAAGCCGAAGCCGCCCATCATCATCACGCGCGACAGCGCAAACGCGCTCAGAACCCACGTGATGGAGGTGGCCGACGGCTGCGATATCATAGAGAGTGTCTCCAACTTTGCCCGCCGGAGGCAGAGAGGGGTTTGTATAATGAGTGGAACAGGGACGGTAACGAACGTGACTCTCAGGCAACCAGCTTCTCCGGGAGCCGTCGTCACTCTCCACGGAAGATTCGAGATATTGTCACTTGCTGGATCGTTTTTACCACCGCCGGCTCCTCCGGCCGCATCAGGATTAACCATATATTTGGCCGGAGGACAAGGGCAAGTCGTAGGAGGAAGCGTGGTTGGGACACTAACAGCTTCAGGTCCAGTGGTGATCATGGCGGCGTCGTTCAGTAACGCTGCGTATGAGAGGCTTCCTTTGGAAGAAGATGATCCCTCCATGCCGATGCAAGGTGGTGGCAGCCGAGAAGGGGGCATCGGCTCTCCAGGTGGTGGTGGTCAACAGCAAGCAGGACAGCTTTTAGGGGATGTGAACACAACGGCTCCACTTTTCCATGGTCTGCCTCCGAATCTTCTGAATTCTATACAGATGCCATCAGAAGCATTCTGGGCTACGGGTCGTCCTCCATACTGA 888 0.5552 MDQITAHPHSLPPPFHTRDLHHPHHQFHSLHQNTEDEQSGSSGGLNLAQKRDREENSNSEGKEMVAVGSGDAEITRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEVADGCDIIESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASPGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLTASGPVVIMAASFSNAAYERLPLEEDDPSMPMQGGGSREGGIGSPGGGGQQQAGQLLGDVNTTAPLFHGLPPNLLNSIQMPSEAFWATGRPPY 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0645 295 MobiDBLite consensus disorder prediction 226 257 - -
Prci5g0645 295 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 35 290 IPR014476 GO:0003680
Prci5g0645 295 FunFam AT-hook motif nuclear-localized protein 103 230 - -
Prci5g0645 295 MobiDBLite consensus disorder prediction 14 32 - -
Prci5g0645 295 PIRSF ESCAROLA 16 295 IPR014476 GO:0003680
Prci5g0645 295 CDD DUF296 104 171 IPR005175 -
Prci5g0645 295 Gene3D - 103 231 - -
Prci5g0645 295 ProSiteProfiles PPC domain profile profile. 100 236 IPR005175 -
Prci5g0645 295 SUPERFAMILY AF0104/ALDC/Ptd012-like 100 229 - -
Prci5g0645 295 MobiDBLite consensus disorder prediction 1 94 - -
Prci5g0645 295 Pfam Plants and Prokaryotes Conserved (PCC) domain 104 217 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0645 Prci-Chr5 9407228 9409071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0645 1 295 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 56.456 3.60e-89 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0645 - - pop:7465813 419.083