Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0633 ATGGATTCTGTTCAATTCCTTCTTCCTCTGTTTCTTCTCTCGCTTGCATTTCCTTGCCTGCAATTTGTTCGAGGAAATGAGGAACTCAGAGCTTTGATGGAGTTGAAGTCGTCTCTGGATCCAGAGGGCAAGGTCCTTGGTTCTTGGACCAGTGGTGGTGATCCATGTAGTGGTTCGTTTCAAGGGATCTTATGCAATGAACACAGGAAAGTGGCCAACATTTCATTGCAGGGAAAGGAGCTCTCGGGATGGCTATCTCCAGCAGTGGCTGAACTCAAATGTTTGTCTGGTTTATTCCTGCACTACAACAATCTCTCAAGGGAGATCCCCAGAGAGATTTCAAATCTCACTGATTTGGGTGAACTCTATCTCGACTTCAATAATCTAACTGGAAACATCCCTCCTGAGCTCGGCAACATGCCTAATCTCCAAGTGCTGCAGTTAGGATATAACCAGCTCGTGGGAGCTATACCGAATGAGATGGGCTCATTGAAGCAGCTTACAGTCCTAGATTTGCAATGCAACAAATTAACTGGTAAAATTCCTCTTAGCTTGGGGAATTTGGAGAAGCTAAGGTTGCTAAATTTGAGCTTTAACAACCTGAATGGTTCAATCCCTGCAACACTTGCTGATCTTGCAAATTTACGAGATCTTGATATCCGAAACAATTCTCTATCAGGAAGAGTTCCTTCTGCTTTGAAGACATTGGGGGATGGATTCCAAGGCGCAAATAACTTGGATTTATGTGGACTTGGGTTTTCTACTTTGAAAGCTTGCAGCAATGATCCAACTTTAGACCCTAGCCAGATTGACATCTCAAATCCAGCAACAGAAGGTCTTCATCCAAAGGACTTTCCCGAACCTGCAAATTTTCACTTGCATTGTAGCCAGACCCATTGCTCAAAATCAAGAATGTTTCCTCAAGCACTCATTGCAGCAAGTGTTTTAACTATCATAATCACGTTCATATGCGTTGGACTTTTCACTTTTCTCAGATACCGCCGCCAAAAGCAAAGAATTAGAAATTCATCAGAATCTTCTGAAGGGAAACTTAGTCCTGATCCGCCTAAAGAATTGTACAAAAGAAGTCTATCACCACTCGTTAATCTTAACTACTATAATGGATGGGATCCGATGACTGATGACCAAAATGGGACCAGATTATCCCATGAGTATCTAAACAGATATAGGTTTAATGTGGATGAGATTGAATCTGCTACACAGTACTTCTCTGAGGCTAACTTATTAAGCAAGAGCAAATTATCAGCAGTCTATAAAGGAATACTCAGGGATGGTTCCCTTGTGGCTATAAGAAGCATTAATGTGACATGCTGCAAGACTGAGGAAGCTGAGTTTGTAAATGGGTTGAACTTAGTACTTTCATTGAGACATGAAAACTTGGTTAGGCTCAGAGGTTTCTGTTGCTCGGCAAGCAGAGGTGAATGTTTCCTTGTCTATGACTTTGCCCCTAAGGGTGACCTGTCTCAATACCTTGACGCGGAAGATGGAAGTGGTCATGTTCTTGACTGGTCCAAGAGGGTTTCTATCATCAAGGGCATCGCAAAAGGTATTGGATATCTACACAGTAATGAAACAAACAATCCCACAATAATACACCAAAATATATCAGTTGAAAAGGTTGTCCTTGACCTTCAATTCAACCCCTTGATCATGGATGCTGGCCTCCCAAAGCTTCTTGCAGACGATGCTGTTTTCTCAGCTCTGAAAGTAAGTGCAGCCATGGGATACCTAGCTCCTGAGTACATTACCACTGGGAGATTCACTGAGAAAAGTGACATATATGCATTTGGGGTTATAATTCTTCAAGTAGTTTCTGGGAAAACTGTTGTGGGTAGTTCAATCAGGATGGCTGTTGAGTCTTTCAGATTTGAAGATTTTGTTGACACGAATCTCAAGGGACGATTTACTAAATCTGAAGCAGCAATGCTTGCCAGGTTGGCAGTGATGTGTACTCATGAGCTTCCTGATCAGAGGCCAACCATGGTGGAAGTGATTCAGGAGCTGAATGGATTTCCTGCACAACATGCTTCTTGA 2055 0.4248 MDSVQFLLPLFLLSLAFPCLQFVRGNEELRALMELKSSLDPEGKVLGSWTSGGDPCSGSFQGILCNEHRKVANISLQGKELSGWLSPAVAELKCLSGLFLHYNNLSREIPREISNLTDLGELYLDFNNLTGNIPPELGNMPNLQVLQLGYNQLVGAIPNEMGSLKQLTVLDLQCNKLTGKIPLSLGNLEKLRLLNLSFNNLNGSIPATLADLANLRDLDIRNNSLSGRVPSALKTLGDGFQGANNLDLCGLGFSTLKACSNDPTLDPSQIDISNPATEGLHPKDFPEPANFHLHCSQTHCSKSRMFPQALIAASVLTIIITFICVGLFTFLRYRRQKQRIRNSSESSEGKLSPDPPKELYKRSLSPLVNLNYYNGWDPMTDDQNGTRLSHEYLNRYRFNVDEIESATQYFSEANLLSKSKLSAVYKGILRDGSLVAIRSINVTCCKTEEAEFVNGLNLVLSLRHENLVRLRGFCCSASRGECFLVYDFAPKGDLSQYLDAEDGSGHVLDWSKRVSIIKGIAKGIGYLHSNETNNPTIIHQNISVEKVVLDLQFNPLIMDAGLPKLLADDAVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIILQVVSGKTVVGSSIRMAVESFRFEDFVDTNLKGRFTKSEAAMLARLAVMCTHELPDQRPTMVEVIQELNGFPAQHAS 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0633 684 Gene3D Phosphorylase Kinase; domain 1 377 488 - -
Prci5g0633 684 FunFam Protein NSP-INTERACTING KINASE 2 25 174 - -
Prci5g0633 684 FunFam Protein NSP-INTERACTING KINASE 2 489 679 - -
Prci5g0633 684 Pfam Leucine rich repeat 166 225 IPR001611 GO:0005515
Prci5g0633 684 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 59 676 - -
Prci5g0633 684 FunFam Protein NSP-INTERACTING KINASE 2 381 488 - -
Prci5g0633 684 SUPERFAMILY Protein kinase-like (PK-like) 388 676 IPR011009 -
Prci5g0633 684 SUPERFAMILY L domain-like 28 252 - -
Prci5g0633 684 ProSiteProfiles Protein kinase domain profile. 410 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0633 684 SMART LRR_typ_2 140 164 IPR003591 -
Prci5g0633 684 SMART LRR_typ_2 188 211 IPR003591 -
Prci5g0633 684 SMART LRR_typ_2 212 242 IPR003591 -
Prci5g0633 684 SMART LRR_typ_2 92 116 IPR003591 -
Prci5g0633 684 Gene3D Transferase(Phosphotransferase) domain 1 489 681 - -
Prci5g0633 684 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Prci5g0633 684 Pfam Protein tyrosine and serine/threonine kinase 416 675 IPR001245 GO:0004672|GO:0006468
Prci5g0633 684 Gene3D Ribonuclease Inhibitor 25 303 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0633 Prci-Chr5 8932426 8936699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0633 10 523 Miscellaneous Gene Families AT4G22730 57.467 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Prci5g0633 PK_Tyr_Ser-Thr 4.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0633 - - pcin:129311672 1335.47