Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0631 ATGGGACTTATGATAAATGCCAAACAATGCGTTCGTGTTACTTCCATGCGGAACCAAAGAAAATTCAAAGAACAACGACAACGAAAGTCATACTGTGTGGTGACCAACAAGTTCAGAGAATCAGAAATGGATTCTGTTCAATTCCTTCTTCCTCTGTTTCTTCTCTCGCTTGCATTTCCTTGCCTGCAATTTGTTCGAGGAAATGAGGAACTCAGAGCTTTGATGGAGTTGAAGTCGTCTCTGGATCCAGAGGGCAAGGTCCTTGGTTCTTGGACCAGTGGTGGTGATCCATGTAGTGGTTCGTTTCAAGGGATCTTATGCAATGAACACAGGAAAGTGGCCAACATTTCATTGCAGGGAAAGGAGCTCTCGGGATGGCTATCTCCAGCAGTGGCTGAACTCAAATGTTTGTCTGGTTTATTCCTGCACTACAACAATCTCTCAAGGGAGATCCCCAGAGAGATTTCAAATCTCACTGATTTGGGTGAACTCTATCTCGACTTCAATAATCTAACTGGAAACATCCCTCCTGAGCTCGGCAACATGCCTAATCTCCAAGTGCTGCAGTTAGGATATAACCAGCTCGTGGGAGCTATACCGAATGAGATGGGCTCATTGAAGCAGCTTACAGTCCTAGATTTGCAATGCAACAAATTAACTGGTAAAATTCCTCTTAGCTTGGGGAATTTGGAGAAGCTAAGGTTGCTAAATTTGAGCTTTAACAACCTGAATGGTTCAATCCCTGCAACACTTGCTGATCTTGCAAATTTACGAGATCTTGATATCCGAAACAATTCTCTATCAGGAAGAGTTCCTTCTGCTTTGAAGACATTGGGGGATGGATTCCAAGGCGCAAATAACTTGGATTTATGTGGACTTGGGTTTTCTACTTTGAAAGCTTGCAGCAATGATCCAACTTTAGACCCTAGCCAGATTGACATCTCAAATCCAGCAACAGAAGGTCTTCATCCAAAGGACTTTCCCGAACCTGCAAATTTTCACTTGCATTGTAGCCAGACCCATTGCTCAAAATCAAGAATGTTTCCTCAAGCACTCATTGCAGCAAGTGTTTTAACTATCATAATCACGTTCATATGCGTTGGACTTTTCACTTTTCTCAGATACCGCCGCCAAAAGCAAAGAATTAGAAATTCATCAGAATCTTCTGAAGGGAAACTTAGTCCTGATCCGCCTAAAGAATTGTACAAAAGAAGTCTATCACCACTCGTTAATCTTAACTACTATAATGGATGGGATCCGATGACTGATGACCAAAATGGGACCAGATTATCCCATGAGTATCTAAACAGATATAGGTTTAATGTGGATGAGATTGAATCTGCTACACAGTACTTCTCTGAGGCTAACTTATTAAGCAAGAGCAAATTATCAGCAGTCTATAAAGGAATACTCAGGGATGGTTCCCTTGTGGCTATAAGAAGCATTAATGTGACATGCTGCAAGACTGAGGAAGCTGAGTTTGTAAATGGGTTGAACTTAGTACTTTCATTGAGACATGAAAACTTGGTTAGGCTCAGAGGTTTCTGTTGCTCGGCAAGCAGAGGTGAATGTTTCCTTGTCTATGACTTTGCCCCTAAGGGTGACCTGTCTCAATACCTTGACGCGGAAGATGGAAGTGGTCATGTTCTTGACTGGTCCAAGAGGGTTTCTATCATCAAGGGCATCGCAAAAGGTATTGGATATCTACACAGTAATGAAACAAACAATCCCACAATAATACACCAAAATATATCAGTTGAAAAGGTTGTCCTTGACCTTCAATTCAACCCCTTGATCATGGATGCTGGCCTCCCAAAGCTTCTTGCAGACGATGCTGTTTTCTCAGCTCTGAAAGTAAGTGCAGCCATGGGATACCTAGCTCCTGAGTACATTACCACTGGGAGATTCACTGAGAAAAGTGACATATATGCATTTGGGGTTATAATTCTTCAAGTAGTTTCTGGGAAAACTGTTGTGGGTAGTTCAATCAGGATGGCTGTTGAGTCTTTCAGATTTGAAGATTTTGTTGACACGAATCTCAAGGGACGATTTACTAAATCTGAAGCAGCAATGCTTGCCAGGTTGGCAGTGATGTGTACTCATGAGCTTCCTGATCAGAGGCCAACCATGGTGGAAGTGATTCAGGAGCTGAATGGATTTCCTGCACAACATGCTTCTTGA 2181 0.4232 MGLMINAKQCVRVTSMRNQRKFKEQRQRKSYCVVTNKFRESEMDSVQFLLPLFLLSLAFPCLQFVRGNEELRALMELKSSLDPEGKVLGSWTSGGDPCSGSFQGILCNEHRKVANISLQGKELSGWLSPAVAELKCLSGLFLHYNNLSREIPREISNLTDLGELYLDFNNLTGNIPPELGNMPNLQVLQLGYNQLVGAIPNEMGSLKQLTVLDLQCNKLTGKIPLSLGNLEKLRLLNLSFNNLNGSIPATLADLANLRDLDIRNNSLSGRVPSALKTLGDGFQGANNLDLCGLGFSTLKACSNDPTLDPSQIDISNPATEGLHPKDFPEPANFHLHCSQTHCSKSRMFPQALIAASVLTIIITFICVGLFTFLRYRRQKQRIRNSSESSEGKLSPDPPKELYKRSLSPLVNLNYYNGWDPMTDDQNGTRLSHEYLNRYRFNVDEIESATQYFSEANLLSKSKLSAVYKGILRDGSLVAIRSINVTCCKTEEAEFVNGLNLVLSLRHENLVRLRGFCCSASRGECFLVYDFAPKGDLSQYLDAEDGSGHVLDWSKRVSIIKGIAKGIGYLHSNETNNPTIIHQNISVEKVVLDLQFNPLIMDAGLPKLLADDAVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIILQVVSGKTVVGSSIRMAVESFRFEDFVDTNLKGRFTKSEAAMLARLAVMCTHELPDQRPTMVEVIQELNGFPAQHAS 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0631 726 SMART LRR_typ_2 182 206 IPR003591 -
Prci5g0631 726 SMART LRR_typ_2 134 158 IPR003591 -
Prci5g0631 726 SMART LRR_typ_2 230 253 IPR003591 -
Prci5g0631 726 SMART LRR_typ_2 254 284 IPR003591 -
Prci5g0631 726 SUPERFAMILY L domain-like 70 296 - -
Prci5g0631 726 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 101 718 - -
Prci5g0631 726 FunFam Protein NSP-INTERACTING KINASE 2 423 530 - -
Prci5g0631 726 Pfam Protein tyrosine and serine/threonine kinase 458 717 IPR001245 GO:0004672|GO:0006468
Prci5g0631 726 FunFam Protein NSP-INTERACTING KINASE 2 67 216 - -
Prci5g0631 726 Gene3D Transferase(Phosphotransferase) domain 1 531 722 - -
Prci5g0631 726 FunFam Protein NSP-INTERACTING KINASE 2 531 721 - -
Prci5g0631 726 ProSiteProfiles Protein kinase domain profile. 452 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0631 726 Pfam Leucine rich repeat 208 267 IPR001611 GO:0005515
Prci5g0631 726 Gene3D Ribonuclease Inhibitor 67 345 IPR032675 -
Prci5g0631 726 Pfam Leucine rich repeat N-terminal domain 68 108 IPR013210 -
Prci5g0631 726 Gene3D Phosphorylase Kinase; domain 1 419 530 - -
Prci5g0631 726 SUPERFAMILY Protein kinase-like (PK-like) 430 718 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0631 Prci-Chr5 8932210 8936699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0631 52 565 Miscellaneous Gene Families AT4G22730 57.467 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Prci5g0631 PK_Tyr_Ser-Thr 5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0631 - - pcin:129311672 1418.68