Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0583 ATGAATACATTTTCACATGTTCCTCCGGGGTTTCGATTCCATCCCACTGATGAAGAACTCGTTGATTACTACCTCAGAAAGAAGATAGCTTCCAAGAGGATTGATCTTGATGTAATCAAAGATGTCGATCTCTACAAAATTGAGCCATGGGATCTTCAAGAGCTATGCAGAATAGGAAGCGAGGAACAAAATGAGTGGTATTTCTTCAGCCATAAAGATAAGAAGTATCCAACAGGAACACGCACGAATAGAGCCACAAAGGCAGGATTCTGGAAAGCCACTGGAAGAGATAAAGCAATATATTCAAAGCATTGTCTGATTGGTATGAGAAAGACTCTTGTGTTCTACAGAGGAAGAGCTCCTAATGGACAGAAATCTGACTGGATCATGCATGAGTATCGCCTTGAAACTAATGAAAATGCAACTCCTCAGGAGGAAGGTTGGGTTGTATGCAGAGTGTTCAAGAAGAGAATTATGACGACAATGAGAGAAGTAGGAGAATATGAATCACCATGTTGGTACGACGAGACAACCTCGTTCATGCAAGACCTTGATCATCAATCTCCTCGACGTAGTAATATTTCTCCACCTAATTACTACGCATGCAAGCAAGAGTTTGAATTCCAATACAACATCATCAATAATCTCCCTCCTCACGATCATACTGCTTTCCTTCAACTTCCTCAGCTTGAAAGCCCTAATAAAGTCCCTATCTTCGGTAATAACGCCTTTGATCATCATCATCACAGAAACAACAATATCAGCAGTAATACCATGAACTCATCATCAACATCGTCACTACTGTATGATCAGGCAGCAGCAGTTTTAGTGGATGATCAAGTTATTACTGATTGGAGAGTGTTTGATAAGTTCGTTGCTTCTCAGCTGAGCCAAGATGATCATCATCACCAACAACAACATGCTGCTTCCAAGGAAACCACTTTTGATAATTCCAATAATAATAATAATAATAATAATAATAATAATAATAATAATGTTGACGTGGTTGCTGTCCCTGAACAAGTTACTATGATATTGGAGAATCAGTCGACAACGAGGTCGTCGGAGTTGGAGCAGGAATATGCATCAGCATCCACCACCACTACCTGCAACAATATTGAACTGTGGAAGTGA 1134 0.3995 MNTFSHVPPGFRFHPTDEELVDYYLRKKIASKRIDLDVIKDVDLYKIEPWDLQELCRIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKHCLIGMRKTLVFYRGRAPNGQKSDWIMHEYRLETNENATPQEEGWVVCRVFKKRIMTTMREVGEYESPCWYDETTSFMQDLDHQSPRRSNISPPNYYACKQEFEFQYNIINNLPPHDHTAFLQLPQLESPNKVPIFGNNAFDHHHHRNNNISSNTMNSSSTSSLLYDQAAAVLVDDQVITDWRVFDKFVASQLSQDDHHHQQQHAASKETTFDNSNNNNNNNNNNNNNNVDVVAVPEQVTMILENQSTTRSSELEQEYASASTTTTCNNIELWK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0583 377 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Prci5g0583 377 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Prci5g0583 377 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 320 - -
Prci5g0583 377 MobiDBLite consensus disorder prediction 310 332 - -
Prci5g0583 377 FunFam NAC domain-containing protein 16 160 - -
Prci5g0583 377 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Prci5g0583 377 MobiDBLite consensus disorder prediction 299 332 - -
Prci5g0583 377 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0583 Prci-Chr5 7837463 7841996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0583 1 370 NAC Transcription Factor Family AT1G62700 53.041 7.26e-136 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci5g0583 NAM 4.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0583 - - zju:107405051 428.713