Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0581 ATGTCCACTGCAACCTTTGTGACACTGTCCTCGCTGTATGATTCCTCTTTTTTTTCTTCACTCCCTAGGGTGAGTGTTCCTTGCACGAGCTTGTTCAAGACTGTGACTGTGCGATGCGGCCATTGCACCAACCTGCTTCCGGTGATAGTGAACATGAGTGGATTGCTTCTGCAATCGCCAAATCAGTTTCACTTGTCTAACTCTTTCTTCTCTCCTCCTCCTCCTCCGTCTCTTAACATCCTGGAGGAGATGCCGAACTCATCAAACCATAATTACTTCTCTGTGCCTCCTACTCCTAGGGTTGCAGCTGATGAGCTTCCACGCCCACCACTCATAAATAGACCCCCTGAGAAGAGGCAGAGAGTCCCATCTGCATACAACCGCTTCATCAAGGACGAGATCCAACGCATCAAGTCTGCAAATCCTGATATAACCCACAGAGAAGCCTTCAGCGCAGCTGCCAAGAATTGGGCCCACTTCCCTCACATACACTATGGTCTCATGCCTGATCAGACTGTGAAGAAGACAAATGTGTGCCAGCAGGAACGAGATGACGACGTTTGCATCAAAGATGGACTTTTCTCCTCGGCTAATGTTGGTGTTTCTCCCTATTAA 615 0.4862 MSTATFVTLSSLYDSSFFSSLPRVSVPCTSLFKTVTVRCGHCTNLLPVIVNMSGLLLQSPNQFHLSNSFFSPPPPPSLNILEEMPNSSNHNYFSVPPTPRVAADELPRPPLINRPPEKRQRVPSAYNRFIKDEIQRIKSANPDITHREAFSAAAKNWAHFPHIHYGLMPDQTVKKTNVCQQERDDDVCIKDGLFSSANVGVSPY 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0581 204 CDD HMG-box_SF 121 157 - -
Prci5g0581 204 Pfam YABBY protein 23 167 IPR006780 GO:0007275
Prci5g0581 204 Gene3D High mobility group box domain 112 174 IPR036910 -
Prci5g0581 204 SUPERFAMILY HMG-box 111 161 IPR036910 -
Prci5g0581 204 PANTHER PROTEIN YABBY 6-RELATED 23 177 IPR006780 GO:0007275
Prci5g0581 204 FunFam Axial regulator YABBY 112 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0581 Prci-Chr5 7783423 7786213 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0581 23 202 C2C2-YABBY Transcription Factor Family AT4G00180 57.635 1.07e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Prci5g0581 YABBY 4.3e-54 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0581 K25796 - gmx:100798441 258.07