Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0576 ATGGATTTGAAGTCGTCTCATGCTTCTCCTGTTCTCACTGATCCTGTTCCGATCAACAAGTCAAGACTAGGAATGCATTCTGGTGTCATAAGTTACTCGCAGCAAGATTCATCATCATCATCATCACTCTCACTCTCTCCTGCTAAGTATTCAAGAAACAGTTCCAGGAAAAGCTCAGGAAATCTTGATGATGTTCGCTTCAATGGTTGGCTCGACGCCATGAAAGCCTCTTCACCTCCCAGGAAGAAGCAACCTAAGGGTGGCTTCAACTCTCACAACATCGATTCCGAGGAAGACCATCGCTCCTGGCTGCTTGATTATCCATCAGCACTGGATTGTTTTGAGGAAATGATAGAGCATGCAACGGACAAGAAGATTGCAATGTTCCTAGACTACGATGGCACTCTTTCACCTATAGTGGATGATCCAGATTGTGCTTTCATGTCTGAAGATATGCGAGCTGTTGTGAGGAGTGTGGCCAAGTGTTTTCCGACGGCAATCATCAGTGGAAGAAGCCGAGACAAGGTTTATGATTTAGTTAAACTAACGGAACTGTACTATGCTGGTAGTCATGGGATGGACATTATTGGGCCTGCCTGTCACTCGCTGTCCAATAAGCATCCAGACTGTGTTAAGTCCACTGACCAACAGGGAAAGGAGATAACTCTGTTTCAACCTGCGAGAGAATTCCTGCCTATGATTAACGAGGTTTTTAAAAGGCTGGTCGAGATTACTAAAGATATAGAGGGTGCGAAAGTTGAGAACCACAAGTTTTGCGTTTCTGTACATTATCGTAATGTAGAAGAAAAGAATTGGACAGCTATTGGACAACTTGTGCATGACATGTTAAAAGATTACCCTCTTTTACGCTCAACACATGGACGAAAGGTTTTAGAGGTTCGTCCAGTGATTGATTGGAACAAAGGAAAAGCAGTTGAATTTTTACTTGAGTCTCTGGGTTTAAGTGAACGAGATGATGTTCTTGCCATTTACATTGGAGATGATAAGACCGATGAAGATGCATTCAAGGTGCTGCGAGAGAGCAGAGGAGGTTATGGGATTTTAGTTTCATCATCCAGAAAGCAAAGTAATGCCTTCTATTCTCTCCGGGATCCAACTCAGGTAATGAAATTTCTGGAAATGTTTGTGAATTGGAAGATGGAAGAAGAAAACAAGAACCAGGGAAAGAGGCATTCGTTTTAA 1203 0.4281 MDLKSSHASPVLTDPVPINKSRLGMHSGVISYSQQDSSSSSSLSLSPAKYSRNSSRKSSGNLDDVRFNGWLDAMKASSPPRKKQPKGGFNSHNIDSEEDHRSWLLDYPSALDCFEEMIEHATDKKIAMFLDYDGTLSPIVDDPDCAFMSEDMRAVVRSVAKCFPTAIISGRSRDKVYDLVKLTELYYAGSHGMDIIGPACHSLSNKHPDCVKSTDQQGKEITLFQPAREFLPMINEVFKRLVEITKDIEGAKVENHKFCVSVHYRNVEEKNWTAIGQLVHDMLKDYPLLRSTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSERDDVLAIYIGDDKTDEDAFKVLRESRGGYGILVSSSRKQSNAFYSLRDPTQVMKFLEMFVNWKMEEENKNQGKRHSF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0576 400 FunFam Trehalose 6-phosphate phosphatase 233 392 - -
Prci5g0576 400 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 49 393 IPR044651 GO:0004805|GO:0005992
Prci5g0576 400 FunFam Trehalose 6-phosphate phosphatase 227 303 - -
Prci5g0576 400 MobiDBLite consensus disorder prediction 1 61 - -
Prci5g0576 400 NCBIfam trehalose-phosphatase 124 383 IPR003337 GO:0003824|GO:0005992
Prci5g0576 400 Gene3D - 126 214 IPR023214 -
Prci5g0576 400 Gene3D - 226 399 IPR023214 -
Prci5g0576 400 SUPERFAMILY HAD-like 127 385 IPR036412 -
Prci5g0576 400 MobiDBLite consensus disorder prediction 75 94 - -
Prci5g0576 400 NCBIfam HAD-IIB family hydrolase 128 346 IPR006379 -
Prci5g0576 400 FunFam Trehalose 6-phosphate phosphatase 126 216 - -
Prci5g0576 400 MobiDBLite consensus disorder prediction 26 61 - -
Prci5g0576 400 CDD HAD_TPP 127 377 - -
Prci5g0576 400 Pfam Trehalose-phosphatase 129 372 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0576 Prci-Chr5 7742523 7749434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0576 124 379 Trehalose Biosynthesis Gene Families AT1G70290 25.275 3.55e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0576 K01087 - qsa:O6P43_024315 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0576 5 7742523 7749434 Prci5g0576 5 7742523 7749434 ECH