Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0548 ATGGGTGCCTACAAGTATGTATCGGAGCTTTGGCGCAAGAAACAGTCTGATGTCATGAAGTTCTTGCAGAGGGTGAGGTGCTGGGAGTATCGGCAGCAACCTTCCATTGTTCGTGTGACAAGGCCTACTCGTCCTGACAAGGCACGTCGCTTGGGCTACAAAGCTAAGCAGGGTTATGTGATTTACCGTGTTCGTGTTCGGAGGGGTGGCCGGAAGAGACCAGTTCCCAAAGGTATTGTATATGGGAAGCCCACAAATCAAGGTGTCACCCAACTGAAATTTCAGAGGAGCAAGAGGTCAGTAGCTGAGGAGCGAGCTGGACGGAAGCTGGGGGGCCTCAGGGTCCTCAATTCTTACTGGGTGAACGAGGACTCGACGTATAAATACTTCGAGATCATCCTGGTCGATGTTGCTCACAATGCTGTCAGAAATGACCCAAGGATCAACTGGTTGTGCAATCCTGTCCACAAACACAGGGAACTGCGTGGCCTCACTTCTGCTGGCAAGAAATACAGAGGCCTCCGTGGCAGAGGACACCTCTATCATAAAGCTCGACCATCCCGCAGGGCTACCTGGAAGAGGAACAATACTCTTTCCCTGCGTCGCTACCGATGA 615 0.5203 MGAYKYVSELWRKKQSDVMKFLQRVRCWEYRQQPSIVRVTRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIILVDVAHNAVRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHLYHKARPSRRATWKRNNTLSLRRYR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0548 204 Pfam Ribosomal L15 2 190 IPR000439 GO:0003735|GO:0005840|GO:0006412
Prci5g0548 204 ProSitePatterns Ribosomal protein L15e signature. 46 69 IPR020925 GO:0003735|GO:0005840|GO:0006412
Prci5g0548 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 IPR000439 GO:0003735|GO:0005840|GO:0006412
Prci5g0548 204 SMART Ribosomal_L15e_2 2 193 IPR000439 GO:0003735|GO:0005840|GO:0006412
Prci5g0548 204 Gene3D Ribosomal protein l15e 1 204 IPR024794 GO:0003735|GO:0005840
Prci5g0548 204 FunFam Ribosomal protein L15 1 204 - -
Prci5g0548 204 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 195 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0548 Prci-Chr5 7008913 7010936 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0548 1 204 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 91.176 8.59e-127 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0548 K02877 - zju:107415665 402.134