Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0510 ATGGCTTTTCCTTGGCCTCTCTCCTTCTCTGTTCAACTGCTCTTTGTTTACACTTTCTCATTGCATGCACTATCTGCAACGGTCACACAACGGGTGGGACCCACCGGTAATCGTGTGATCACCGTCGATGTCAACGGAGGAGGGAACTTCCGGTCGGTCCAAGCCGCCGTTGATGCTGTCCCAGACAACAATAGAGTGAACGTCACTATTCAAATCAGCGCCGGATACTACATAGAGAAAGTGGTCGTGCCGGCGACCAAGCCGTACATTACGTTTCAAGGAGCTGGGAGGGAGAAGACGGTGATAGAATGGCATGATCGAGCCAGTGATCTCGGACCCAGTGGACAACAATTACGTACTTACAGAACAGCTTCTGTGACTGTTTTTGCCAACTTTTTCTCTGCGAGGAACATCAGCTTCAAGAATACAGCGCCGGCACCGATGCCGGGAATGGAGGGGTGGCAAGCGGCGTCGTTTAGGATATCAGGGGACAAAGCGTACATGTTGGGATGTGGATTCTACGGAGCACAAGACACTCTCTGCGACGATGCTGGACGACATTACTTCAAGGATTGTTACATCGAAGGTTCCATTGATTTCATCTTTGGAAATGGCAGATCCATGTACAAGGATTGCGAGCTGCACTCTATAGCAACAAGGTTCGGGTCAATAGCAGCCCAAGGTCGAAAGAGCTCAAATGAGAAGACAGGCTTTGCTTTTGTAGGATGCAGAGTGACGGGTACTGGGCCAATTTATGTGGGCCGAGCATTGGGCCCATATTCAAGAATCGTTTACGCTTATACATATTTCGACGACATTGTCGCTCATGCTGGTTGGGATAATTGGAATCACGACCAAAACAAAAACAAGACAATATTCTTTGGAATTTACAAGTGCTGGGGCCCAGGAGCCACATCATTGCAAGGGATCTCATGGGCCCCAGAGCTAGATTTCAAATCTGCCCATCCATTTCTCGCCAAGAGCTTCATCAATGGTAGACATTGGATACCAGCCTCTGATGCTTAG 1026 0.4893 MAFPWPLSFSVQLLFVYTFSLHALSATVTQRVGPTGNRVITVDVNGGGNFRSVQAAVDAVPDNNRVNVTIQISAGYYIEKVVVPATKPYITFQGAGREKTVIEWHDRASDLGPSGQQLRTYRTASVTVFANFFSARNISFKNTAPAPMPGMEGWQAASFRISGDKAYMLGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQGRKSSNEKTGFAFVGCRVTGTGPIYVGRALGPYSRIVYAYTYFDDIVAHAGWDNWNHDQNKNKTIFFGIYKCWGPGATSLQGISWAPELDFKSAHPFLAKSFINGRHWIPASDA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0510 341 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 34 336 - -
Prci5g0510 341 Pfam Pectinesterase 40 332 IPR000070 GO:0030599|GO:0042545
Prci5g0510 341 ProSitePatterns Pectinesterase signature 2. 194 203 IPR033131 -
Prci5g0510 341 Gene3D - 35 341 IPR012334 -
Prci5g0510 341 FunFam Pectinesterase 35 338 - -
Prci5g0510 341 SUPERFAMILY Pectin lyase-like 36 338 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0510 Prci-Chr5 6673813 6678414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0510 9 341 Carbohydrate Esterase AT5G47500 69.801 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0510 - - cam:101501763 565.459