Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0476 ATGAAGGGAGAAGAGGTGAAAGGTGAACAAGAAGAGCAATTATATTTAGAGGATCGTGATATTGGAAGAAGAAGCTTGGTTGTGAGTGATGTGAAAAGGGTACTTGTTGGAGCAGGGGCTCGTGCTCTTTTCTATCCTACTCTGCTTTACAATGTCCTTAGGAATAGGTTTCAGGCTGAGTTTCGGTGGTGGGATAAAGTTGATGAGTTCATATTATTAGGTGCTGTTCCATTTCCTATTGATGTTCCCCGCTTGAAGGAGCTTGGCGTTTGTGGAGTCATCACATTGAACGAGTCATATGAGACCTTGGTTCCAACCACACTATATCATGCTCATGGAATCGAGCATTTGGTTATTCCTACTAGAGATTATTGTTTTGCACCGTCATTACGTGACATATGCCGTGCTGTGGACTTCCTACATGAAAATGCATCGTCTGGGAGAAGTACATATGTCCACTGCAAAGCTGGGCGTGGTCGCAGCACAACCATTGTTATCTGTTACCTGGTACATTACCAGATGATGACACCTGATGATGCATATGATTATGTAAAGTCAATTCGACCAAGGGTTCTACTAGCATCTTCTCAGTGGCAAGCTGTTCAGGAATACTACCACATCATGGTGAAGAACACAATTTCATATCTTCCCACGGCCAATTTACTTTTGAGGCCATCACAGGCTTCTGCATCAGCGTCCAAAGACTTGGTAAAATTTGATGATGATGGGTCTGTAGTTGTAACAGAGTCAGATCTTGAAGGGTACGATCCAAGAATCCAACCAAGTGGTGTGAGAAGAGAGATATGGGCAGATCTAAGTTTTGCGTACCATGTTCGAGTTGCTGGGCAGGCTGCACTGACAGGAATGTCATGGCTCAGGCTGAGATGTGTGTCAAAGCCAAGGAAAATGAAGGGAAGGGGAAATAGTTCCTCATTCACAAGTGATCATTTGGGAGGAATTAGCGTTGATATCCATGTGTACTGA 984 0.438 MKGEEVKGEQEEQLYLEDRDIGRRSLVVSDVKRVLVGAGARALFYPTLLYNVLRNRFQAEFRWWDKVDEFILLGAVPFPIDVPRLKELGVCGVITLNESYETLVPTTLYHAHGIEHLVIPTRDYCFAPSLRDICRAVDFLHENASSGRSTYVHCKAGRGRSTTIVICYLVHYQMMTPDDAYDYVKSIRPRVLLASSQWQAVQEYYHIMVKNTISYLPTANLLLRPSQASASASKDLVKFDDDGSVVVTESDLEGYDPRIQPSGVRREIWADLSFAYHVRVAGQAALTGMSWLRLRCVSKPRKMKGRGNSSSFTSDHLGGISVDIHVY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0476 327 ProSitePatterns Tyrosine specific protein phosphatases active site. 152 162 IPR016130 GO:0016311|GO:0016791
Prci5g0476 327 Gene3D Protein tyrosine phosphatase superfamily 63 212 IPR029021 -
Prci5g0476 327 FunFam Dual specificity phosphatase domain protein 63 210 - -
Prci5g0476 327 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 56 210 IPR029021 -
Prci5g0476 327 SMART ptp_7 105 210 IPR003595 -
Prci5g0476 327 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 265 - -
Prci5g0476 327 SMART dsp_5 66 207 IPR020422 GO:0006470|GO:0008138
Prci5g0476 327 Pfam Dual specificity phosphatase, catalytic domain 94 205 IPR000340 GO:0008138|GO:0016311
Prci5g0476 327 ProSiteProfiles Dual specificity protein phosphatase domain profile. 63 210 IPR020422 GO:0006470|GO:0008138
Prci5g0476 327 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 131 199 IPR000387 GO:0016311|GO:0016791
Prci5g0476 327 CDD PTPMT1 63 205 IPR044596 GO:0004721
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0476 Prci-Chr5 6211398 6214537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0476 4 327 Protein tyrosine phosphatase (PTP) family AT2G35680 57.353 7.78e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0476 - - zju:107430324 451.825