Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0474 ATGCAAGAGGAAGATGAATTGGAACCCAAAATAGGGAGGGAGTTTGAAAATTTAGATGAGGCATGGGAGTTTTGGACAGAATATGGTAAAAGAATTGGATTTGGAGTTAGAAAGGGTACTTCTACAAAGAGTAGAGCAGACAAATCCATTATTATTACATATAGATTTTTATGTTGCAAGGAAGGTCTGCGAAGGAAAAATGAAAAAAGGGCATATGCTTCTACACATCGACCAGAGACAAGGACTAATTGTAAGGCAAGAATGGTAGTATCTCGTGTTGGCCAAAAGTTTAGAATCACTGTGATTGATAGAGAACATAATCACCCACTTCACACAAAAGACACAGTAAGCTTGTTACCATGTCAGAGAAATATATCAGAAGCTCAAGCCTATGAAATGGATCTTGCAGAAGAATCTGGACTTGAACCTAGGGATACTTTTGACTTAATGAGTACATATGCCGGTGGTCCAGAAAATCTTGGTTATACAATGACAGATGTAAAGACTTACTTGATGTGCAAAAGGAAGAGACATATGAAGTTTGGTGAGGTGGGGTGTCTACTTGAATACTTTCAGAAACAAATTGAAGAAAATCCAGCATTCTACCATAAATATCAATTGGACCCTGATCAACACATCACTAATGTTTTTTGGGCCGATGCTCGCATGCTAATAGATTATGCACATTTTGGTGAGGTTGTATCACTTGATACAACATATAGCACAAATCAGAATCATAGACCCCTTGCACTATTTTCTGGCTTCAATCATCATAGAAGTGTGGTCATTTTTGGAGCAGCACTATTATATGATGAGACAATTGAGTCTTTTAAATGGTTGTTAGAAACATTTTTGGATGCTCATATACAAAAAAAGCCTCAAACTGTGTTTACAGACCAAGATCAAGCGATGGCAAGAGCATTGTGCGAAGTTCTTCCCAATACAAAACATTGTTTGTGTAGTTGGCATTTATTAAAAAATGGTGTTAAACACCTTGGGAACCTCATGAAAGATGGGTCACATTTTTTAACTGATTTCAAGAAATGCATGTTTAATTATGTTGATGTAGAGAAGTTTGAAGAAGCATGGAGCCAATTATTATCTTCTTATAATGTTCATGAAAATGGATGGTTGAAGTCTACTTATGATATTAAGGAGAAATGGGCTTGGTGCTATGTGAAGGAAACATGCACACTAGGCATGAGGAGCACACAGATTAGTGAAAGTGTGAATGCTGATGTGAAGAGATGTACAAAGCCAAAATTGGACATCAAACGATTTTTTAAAAGGTTTGACAAGGTTGTGGCAAAGAAGCGATACAAAGAAGTGGAACTTGAGTATGAATCTCGACAAAAGATTCCAAGGATGGTTAATCAAAGTGCACCTATTCTACGCCAACTTGTGCAAGTTTATACCCCTACTGTTTTTGACATGTTTCAAGAGCAATGGGATCTCCAATTCTCTGTAGAATTAATTACACGTGATGAGAAAGAGTCATTATTTGTATATATTGCCCATATGATTGATCAGGAAGGGGAATGGAGAGTTGAGTTCAAACCTGATACCCATGAAATTTTTTGTACTTGTCAAAAGTTTGAGTCCACGGGAATATTTTGTTGTCATGCATTAAAAGTGTACGAGTCAAAGGATGTAAGAGTTATGCCTGACCAGTATATTCTAAAGCGTTGGACTAAGGAAGCAAGGTTTGGTGTTGTCCATGATGTTAGAGGAAATGAGATTCAAGTAGATCCTAGACTTGACATCACGCAGAGGTATAGACAGTTAATGCTTATGATGGGAAGATTGGCATCCAAGGCTGCTAAGACACTTGAGGGATTTACTTGTGTTCAGAGATGTGTCATTGAGTTAGAAAATCATATTCCTAATGGTAATGAAAATGATACTTCTAAACTAGTCATAGAGTCACAAAATATGCCAAAGGGGTTCAAAAAAAGAGATGGAAAATCAAGCAAGAGACGTTGGAAAGGTTGGGAAGAGAAGAATTTAAAAACAAGAAGAAGAGTTGTATCAAAGGCACAAAGTAATGAAATTCCATCACTTGAAGCTATAGATCTTATGGAAAACTACTCACAAGATTTCTTTCCAACTCTGTCAGCAACATCTATCCTGCAACCAGTATAG 2142 0.3693 MQEEDELEPKIGREFENLDEAWEFWTEYGKRIGFGVRKGTSTKSRADKSIIITYRFLCCKEGLRRKNEKRAYASTHRPETRTNCKARMVVSRVGQKFRITVIDREHNHPLHTKDTVSLLPCQRNISEAQAYEMDLAEESGLEPRDTFDLMSTYAGGPENLGYTMTDVKTYLMCKRKRHMKFGEVGCLLEYFQKQIEENPAFYHKYQLDPDQHITNVFWADARMLIDYAHFGEVVSLDTTYSTNQNHRPLALFSGFNHHRSVVIFGAALLYDETIESFKWLLETFLDAHIQKKPQTVFTDQDQAMARALCEVLPNTKHCLCSWHLLKNGVKHLGNLMKDGSHFLTDFKKCMFNYVDVEKFEEAWSQLLSSYNVHENGWLKSTYDIKEKWAWCYVKETCTLGMRSTQISESVNADVKRCTKPKLDIKRFFKRFDKVVAKKRYKEVELEYESRQKIPRMVNQSAPILRQLVQVYTPTVFDMFQEQWDLQFSVELITRDEKESLFVYIAHMIDQEGEWRVEFKPDTHEIFCTCQKFESTGIFCCHALKVYESKDVRVMPDQYILKRWTKEARFGVVHDVRGNEIQVDPRLDITQRYRQLMLMMGRLASKAAKTLEGFTCVQRCVIELENHIPNGNENDTSKLVIESQNMPKGFKKRDGKSSKRRWKGWEEKNLKTRRRVVSKAQSNEIPSLEAIDLMENYSQDFFPTLSATSILQPV 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0474 713 ProSiteProfiles Zinc finger SWIM-type profile. 514 550 IPR007527 GO:0008270
Prci5g0474 713 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 626 IPR031052 GO:0006355
Prci5g0474 713 SMART 26again6 525 552 IPR006564 GO:0008270
Prci5g0474 713 Pfam FAR1 DNA-binding domain 23 111 IPR004330 -
Prci5g0474 713 Pfam SWIM zinc finger 524 549 IPR007527 GO:0008270
Prci5g0474 713 Pfam MULE transposase domain 233 327 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0474 Prci-Chr5 6199068 6201989 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci5g0474 MULE 2.8e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0474 - - pcin:129293091 1400.96