Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0473 ATGGCAGTCACATTCGTTGATGTCAACTCTGCTTCTGGGTTGAAAAAGCTTGACGAATACCTTCTCACCCGCAGTTATATAACTGGGTATCAAGCTTCAAAGGACGATATTACAGTATACGCAGCCTTGTCAAAGGCCCCATCAGCTGAATATGTGAACGCTTCCCGGTGGTACAAGCACATTGATGCTCTGTTGAGAATGTCTGGTGTATCTGGTAACGGATCTGGAGTCAAAGTGGAGGGTTCTCTCCCCATGGCAGGGGAGGCCATTGCCACTCCTCCACCAGCTGACACAAAGGCTACATCAGCTGAGGATGATGATGATGATGATGATGATGATGTGGATTTGTTTGGTGAAGAGACAGAAGAGGAGAAGAAGGCTGCTGAAGAACGGGCAGCTGCCGTGAAGGCATCTTCAAAGAAGAAAGAATCTGGGAAGTCATCTGTTCTGTTGGATGTGAAGCCTTGGGATGACGAGACGGACATGAAAAAGCTTGAAGAAGCAGTGAGAGGAGTTCAGATGGAAGGATTGCTTTGGGGTGCTTCCAAACTTGCCCCCGTTGGGTACGGTATCAAGAAAATGCAAATTATGCTTACTATAGTGGATGACCTGGTCTCGGTTGACAGCCTTATTGAGGAACATCTTATGAACGAGCCAATCAACGAATATGTCCAGAGCTGTGACATTGTGGCCTTCAATAAAATATGTTAG 711 0.4655 MAVTFVDVNSASGLKKLDEYLLTRSYITGYQASKDDITVYAALSKAPSAEYVNASRWYKHIDALLRMSGVSGNGSGVKVEGSLPMAGEAIATPPPADTKATSAEDDDDDDDDDVDLFGEETEEEKKAAEERAAAVKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRGVQMEGLLWGASKLAPVGYGIKKMQIMLTIVDDLVSVDSLIEEHLMNEPINEYVQSCDIVAFNKIC 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0473 236 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 224 235 IPR001326 GO:0003746|GO:0005853|GO:0006414
Prci5g0473 236 SUPERFAMILY eEF-1beta-like 143 235 IPR036219 -
Prci5g0473 236 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 235 - -
Prci5g0473 236 FunFam Elongation factor 1-beta 1 like 140 235 - -
Prci5g0473 236 Gene3D - 139 235 IPR014717 -
Prci5g0473 236 Pfam EF-1 guanine nucleotide exchange domain 148 235 IPR014038 GO:0003746|GO:0006414
Prci5g0473 236 CDD EF1B 149 235 IPR014038 GO:0003746|GO:0006414
Prci5g0473 236 Gene3D - 3 76 - -
Prci5g0473 236 MobiDBLite consensus disorder prediction 120 139 - -
Prci5g0473 236 FunFam Elongation factor 1-delta 1 3 78 - -
Prci5g0473 236 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 110 118 IPR001326 GO:0003746|GO:0005853|GO:0006414
Prci5g0473 236 SUPERFAMILY GST C-terminal domain-like 8 67 IPR036282 -
Prci5g0473 236 Coils Coil 118 138 - -
Prci5g0473 236 SMART EF1_GNE_2 146 235 IPR014038 GO:0003746|GO:0006414
Prci5g0473 236 MobiDBLite consensus disorder prediction 87 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0473 Prci-Chr5 6186284 6188814 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0473 5 235 Eukaryotic Initiation Factors Gene Family AT2G18110 78.355 5.96e-115 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0473 K03232 - qsa:O6P43_022557 341.273