Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0467 ATGGCAAATCCTGTTGAACTTTCAGCCCTCAATCGTATAAAATTGCATCTTCTAGGTGAACTGTCTCCTGTTGGCAGTTCAGCAGGCGATGCTATCCAACACCTACAGCTCTCGTTTGGTGAACCGAACGGAGCAATTACCAGCTCTGATTCTGACTCTCTGTGTTCCCAATCATCAAGTTCTGACTCTTCTATCACTGTGTCTGATTACCTCCCTGAACTATTCGACTTCCCATCAAACCTATTTGAGTTCGAGTTCAAAAATCAAGTCATTGACCTCTCAACGCCCAAATTCGAAACCGAAGCTTCACAATTTAACTCCCATTTTTCCGAATCAAATGCAAACTCACAGGCAACTTCAAGCTCTGGCTCACAGACCAGCAGTTGTATGTTCGAGTTTCAAACTACACCCCAAATCGTCGAGAAGAAATCTCACTTAAATCGGAAACCATCGCTGAAAATTACGCCACCGAAAAAAACCGAGTGGATCCAATTTGGAAACCCGGATCAACAACAGGAGGTTTCAGAGGTGTTCGTGCAGAATAAGTCAGACCTTGAAGTAAAAAGGCACTACAGAGGAGTCCGACAGAGACCATGGGGCAAGTTCGCAGCAGAAATTCGGGACCCGAACAAACGTGGAGCTAGGGTGTGGCTCGGAACGTTCGATACGGCGATCGAAGCCGCAAAAGCCTACGATCGAGCCGCGTTTAAGCTTCGCGGATCCAAAGCCATACTCAATTTTCCTCTGGAAGCAGGAACCTCCGGTTCGACGGACGGCACGGAGGAGAAAAAACGCCGGCGGCAAGATGATGCGGTGGAGGCTGAAATGGAAGTTAAACCAGTAGTGAAGAAAGAGAGGACGGCGGAATCTGACGTGGGAAGAATAAGGGATACACCGCTAACGCCGTCAATGTGTACAGGCTTCTGGGATAGTGATTTGAAGGACATCTTCGCAGTCCCGCCGTTATCGCCGTTATCTCCTCACCCCACTTTGGGTTATCCACAACTCATGGTTGTATGA 1020 0.4804 MANPVELSALNRIKLHLLGELSPVGSSAGDAIQHLQLSFGEPNGAITSSDSDSLCSQSSSSDSSITVSDYLPELFDFPSNLFEFEFKNQVIDLSTPKFETEASQFNSHFSESNANSQATSSSGSQTSSCMFEFQTTPQIVEKKSHLNRKPSLKITPPKKTEWIQFGNPDQQQEVSEVFVQNKSDLEVKRHYRGVRQRPWGKFAAEIRDPNKRGARVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEAGTSGSTDGTEEKKRRRQDDAVEAEMEVKPVVKKERTAESDVGRIRDTPLTPSMCTGFWDSDLKDIFAVPPLSPLSPHPTLGYPQLMVV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0467 339 MobiDBLite consensus disorder prediction 249 272 - -
Prci5g0467 339 ProSiteProfiles AP2/ERF domain profile. 190 248 IPR001471 GO:0003700|GO:0006355
Prci5g0467 339 MobiDBLite consensus disorder prediction 104 127 - -
Prci5g0467 339 PANTHER DNA-BINDING DOMAIN 117 265 IPR044808 GO:0003700|GO:0009873
Prci5g0467 339 SUPERFAMILY DNA-binding domain 190 249 IPR016177 GO:0003677
Prci5g0467 339 SMART rav1_2 190 254 IPR001471 GO:0003700|GO:0006355
Prci5g0467 339 Pfam AP2 domain 190 240 IPR001471 GO:0003700|GO:0006355
Prci5g0467 339 Gene3D AP2/ERF domain 189 250 IPR036955 GO:0003700|GO:0006355
Prci5g0467 339 PRINTS Ethylene responsive element binding protein signature 191 202 IPR001471 GO:0003700|GO:0006355
Prci5g0467 339 PRINTS Ethylene responsive element binding protein signature 230 250 IPR001471 GO:0003700|GO:0006355
Prci5g0467 339 MobiDBLite consensus disorder prediction 257 272 - -
Prci5g0467 339 CDD AP2 190 248 IPR001471 GO:0003700|GO:0006355
Prci5g0467 339 FunFam Ethylene-responsive transcription factor 2 189 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0467 Prci-Chr5 6149386 6150664 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0467 1 339 AP2-EREBP Transcription Factor Family AT5G47230 43.860 3.40e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci5g0467 AP2 5e-16 CL0081