Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0466 ATGTACGGAGAGGCTACCTATGAGTCGGATTCAGCCTGGTTGGAGTCAATTCGACTCCACTTGCTCGGTGACCTCGAGACTGCTTTTCCTGCTGATTCGGATACTTCTTCGGGTTCCGATCCGGTTTATACTCGGAGCTCCAGTTTCAGCAGCTTGTACCCGTGCTTGACGGACAACTGGGGCGAATTGCCGCTCAAGGAAGACGATTCTGAAGACATGGTGCTCTACGGCGTCCTCCGCGATGCAGTTCACGTCGGGTGGGTTCCCTCCCTCGATGTCGGGTCGCCCGAAAGCATTTCTTCTGGTTTCACCCCGTCTGTTACAGTGAAATCGGAACCCGATGTCTTGCCGGTGCTGGATTCCCCCGCGGGCCCTCCAGTGGTAAAGCAAGAGGAGGTGGCCGAAGCAGTCGCACCGGCCGCAGTTCCGTCGAAGGGAAAGCATTACAGAGGAGTAAGACAACGGCCGTGGGGGAAATTCGCGGCGGAGATCCGTGATCCGGCGAAGAACGGTGCTAGGGTTTGGCTCGGAACATTCGAGACGGCCGAAGACGCGGCTCTCGCCTACGATCGAGCCGCGTACAGGATGCGAGGCTCCCGGGCTCTGCTGAATTTCCCACTGAGAGTGAACTCGGGTGAACCTGACCCAGTGAGAGTGACGTCGAAGAGGTCATCGCCGGACAGATCGTGGTCGACATCGTCGTCGTCGTCGGAGAGCGGCGCATCGCCGAAGAGAAGGAAGAAGTTGGTGGTGGTGGGGACAGGCCCAAAGGCTACCGGGCAAGTGGGAAGCCAAGTGGGTCTTGGAACGACGTCGTGCGTACGTGGAGGAGCGTTACTAGTTACTAATGCGTAA 855 0.5825 MYGEATYESDSAWLESIRLHLLGDLETAFPADSDTSSGSDPVYTRSSSFSSLYPCLTDNWGELPLKEDDSEDMVLYGVLRDAVHVGWVPSLDVGSPESISSGFTPSVTVKSEPDVLPVLDSPAGPPVVKQEEVAEAVAPAAVPSKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSPDRSWSTSSSSSESGASPKRRKKLVVVGTGPKATGQVGSQVGLGTTSCVRGGALLVTNA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0466 284 Gene3D AP2/ERF domain 147 209 IPR036955 GO:0003700|GO:0006355
Prci5g0466 284 SUPERFAMILY DNA-binding domain 148 208 IPR016177 GO:0003677
Prci5g0466 284 MobiDBLite consensus disorder prediction 223 240 - -
Prci5g0466 284 MobiDBLite consensus disorder prediction 208 249 - -
Prci5g0466 284 CDD AP2 147 206 IPR001471 GO:0003700|GO:0006355
Prci5g0466 284 ProSiteProfiles AP2/ERF domain profile. 148 206 IPR001471 GO:0003700|GO:0006355
Prci5g0466 284 PANTHER DNA-BINDING DOMAIN 131 238 IPR044808 GO:0003700|GO:0009873
Prci5g0466 284 FunFam Ethylene-responsive transcription factor 2 147 207 - -
Prci5g0466 284 Pfam AP2 domain 148 198 IPR001471 GO:0003700|GO:0006355
Prci5g0466 284 PRINTS Ethylene responsive element binding protein signature 149 160 IPR001471 GO:0003700|GO:0006355
Prci5g0466 284 PRINTS Ethylene responsive element binding protein signature 172 188 IPR001471 GO:0003700|GO:0006355
Prci5g0466 284 SMART rav1_2 148 212 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0466 Prci-Chr5 6126642 6127938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0466 1 281 AP2-EREBP Transcription Factor Family AT4G17500 54.110 4.68e-85 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci5g0466 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0466 K09286 - gmx:100819649 314.309