Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0460 ATGCACGAGGCATTAAGGTGCACTTGTTCTCATGTCAATATATATAAGGTTCTGCAGGTTATAATTCTTTTGAAGGAAGACGACATGTGCCGTCAAAATTCTCCTGTACATCATTCTACTGAGGAAGACACTGCAGCTGATGAGAGTCTTCTTATTTATTGCAAGCCTGTTGAACTGTACAATATTCTCTACCGCCGTTCTCTTCATAATCCTTCATTTCTTAGGAGATGTCTGCACTACAAATTACGAGCAAGGCATAGAAAGAGGTTAAGAGCTGGAATTGTGATCTTCAATTATAGGGACTGTTACAACGCAATTCGAAAGACTGAAGTGACTGAGGACTTTTCTTGTCCATTTTGCTTGATGCAATGTGCGAGCTTTAAGGGCTTGCGATTTCATCTTTGTGCATCACATGATCTCTTCAACTTTGAATTTTGGGTGACTGAAGACTATCAAGCAGTGAACGTCTCTGTGAAGAGTGATATATTGAGATCAGAGAATGTCACTGATGGAATAAATCCACAGTCACAAACCTTCTTCTTCTGTGCAAGGCATCGACGACGTATACACAAAGATTCTATTCAAAATGATAAGTGTGCTAACATACAGTTTCTGGAGTTGGATTCACACATGCTGGCTACAGAAGGCATACAGAATGGTTGTCAAGACAAGTACCATGACACCCTGTCCGGCAAAGGTGGGAACTTGTCCAAGACATCTCCCAGTCAGAAAGAATTGCAGAATGGAACACAGGATGGAGAAAACTATGGTCCTTATCATCCTGGTAGTGGTACTACTGATTACTTGGAGCATGTTGCTTCTAGTTTCAACGTTCCAGGTGTTCCAATTGCCATGCCCCAAACTTCTAGGGACCCTGAGTGTAATAAATCAGTATCTAGATGTGAAGCAGCTTTGCCTGCCAAGACTAGGAAGATGAACGTGGATCGATCAGACTCAAGAAACCGTTTGCTCCTGCAGAAAAGACAGTTCTTTCACTCTCACAGAGTTCAGCCTATGGCACTGGAACAAGTGTTATCAGATCAGGACAGTGAAGATGAGGTTGATGATGACATTGCAGATCTTGAAGATCGAAGAATGCTTGATGATTTTGTTGACGTTTCCAAAGATGAAAAGCAGCTTATGCATCTATGGAATTCTTTTGTGAGGAAGCAAAGCGTGCTGGCAGATGGTCATGTTCCCTGGGCCTGTGAGGCCTTCTCCAAGCTTCATGGGAAGGAGTTGATCTCATCTCCCACTCTATTTTGGTGTTGGAGGTTATTCATGATCAAACTTTGGAATCATGGCCTTCTTGATGCTCCTACCATGAACAACTGTAGTATCATTTTAGATAGTTTCAGAAACGAGGGGTCTGATGGCGGCAAAAATTGA 1389 0.4226 MHEALRCTCSHVNIYKVLQVIILLKEDDMCRQNSPVHHSTEEDTAADESLLIYCKPVELYNILYRRSLHNPSFLRRCLHYKLRARHRKRLRAGIVIFNYRDCYNAIRKTEVTEDFSCPFCLMQCASFKGLRFHLCASHDLFNFEFWVTEDYQAVNVSVKSDILRSENVTDGINPQSQTFFFCARHRRRIHKDSIQNDKCANIQFLELDSHMLATEGIQNGCQDKYHDTLSGKGGNLSKTSPSQKELQNGTQDGENYGPYHPGSGTTDYLEHVASSFNVPGVPIAMPQTSRDPECNKSVSRCEAALPAKTRKMNVDRSDSRNRLLLQKRQFFHSHRVQPMALEQVLSDQDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFVRKQSVLADGHVPWACEAFSKLHGKELISSPTLFWCWRLFMIKLWNHGLLDAPTMNNCSIILDSFRNEGSDGGKN 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0460 462 MobiDBLite consensus disorder prediction 232 254 - -
Prci5g0460 462 CDD VEFS-box_EMF2-like 325 451 - -
Prci5g0460 462 CDD ZnB-Zn_EMF2-like 41 162 - -
Prci5g0460 462 PANTHER POLYCOMB GROUP PROTEIN 37 88 - -
Prci5g0460 462 Pfam VEFS-Box of polycomb protein 312 447 IPR019135 -
Prci5g0460 462 MobiDBLite consensus disorder prediction 232 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0460 Prci-Chr5 6041628 6048899 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0460 27 96 C2H2 Transcription Factor Family AT5G51230 51.429 7.06e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0460 - - pcin:129311384 920.613