Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0459 ATGCACGAGGCATTAAGGTGCACTTGTTCTCATGTCAATATATATAAGGTTCTGCAGGTTATAATTCTTTTGAAGGAAGACGACATGTGCCGTCAAAATTCTCCTGTACATCATTCTACTGAGGAAGACACTGCAGCTGATGAGAGTCTTCTTATTTATTGCAAGCCTGTTGAACTGTACAATATTCTCTACCGCCGTTCTCTTCATAATCAGCCTTCATTTCTTAGGAGATGTCTGCACTACAAATTACGAGCAAGGCATAGAAAGAGGTTAAGAGCTGGAATTGTGATCTTCAATTATAGGGACTGTTACAACGCAATTCGAAAGACTGAAGTGACTGAGGACTTTTCTTGTCCATTTTGCTTGATGCAATGTGCGAGCTTTAAGGGCTTGCGATTTCATCTTTGTGCATCACATGATCTCTTCAACTTTGAATTTTGGGTGACTGAAGACTATCAAGCAGTGAACGTCTCTGTGAAGAGTGATATATTGAGATCAGAGAATGTCACTGATGGAATAAATCCACAGTCACAAACCTTCTTCTTCTGTGCAAGGCATCGACGACGTATACACAAAGATTCTATTCAAAATGATAAGTGTGCTAACATACAGTTTCTGGAGTTGGATTCACACATGCTGGCTACAGAAGGCATACAGAATGGTTGTCAAGACAAGTACCATGACACCCTGTCCGGCAAAGGTGGGAACTTGTCCAAGACATCTCCCAGTCAGAAAGAATTGCAGAATGGAACACAGGATGGAGAAAACTATGGTCCTTATCATCCTGGTAGTGGTACTACTGATTACTTGGAGCATGTTGCTTCTAGTTTCAACGTTCCAGGTGTTCCAATTGCCATGCCCCAAACTTCTAGGGACCCTGAGTGTAATAAATCAGTATCTAGATGTGAAGCAGCTTTGCCTGCCAAGACTAGGAAGATGAACGTGGATCGATCAGACTCAAGAAACCGTTTGCTCCTGCAGAAAAGACAGTTCTTTCACTCTCACAGAGTTCAGCCTATGGCACTGGAACAAGTGTTATCAGATCAGGACAGTGAAGATGAGGTTGATGATGACATTGCAGATCTTGAAGATCGAAGAATGCTTGATGATTTTGTTGACGTTTCCAAAGATGAAAAGCAGCTTATGCATCTATGGAATTCTTTTGTGAGGAAGCAAAGCGTGCTGGCAGATGGTCATGTTCCCTGGGCCTGTGAGGCCTTCTCCAAGCTTCATGGGAAGGAGTTGATCTCATCTCCCACTCTATTTTGGTGTTGGAGGTTATTCATGATCAAACTTTGGAATCATGGCCTTCTTGATGCTCCTACCATGAACAACTGTAGTATCATTTTAGATAGTTTCAGAAACGAGGGGTCTGATGGCGGCAAAAATTGA 1392 0.4231 MHEALRCTCSHVNIYKVLQVIILLKEDDMCRQNSPVHHSTEEDTAADESLLIYCKPVELYNILYRRSLHNQPSFLRRCLHYKLRARHRKRLRAGIVIFNYRDCYNAIRKTEVTEDFSCPFCLMQCASFKGLRFHLCASHDLFNFEFWVTEDYQAVNVSVKSDILRSENVTDGINPQSQTFFFCARHRRRIHKDSIQNDKCANIQFLELDSHMLATEGIQNGCQDKYHDTLSGKGGNLSKTSPSQKELQNGTQDGENYGPYHPGSGTTDYLEHVASSFNVPGVPIAMPQTSRDPECNKSVSRCEAALPAKTRKMNVDRSDSRNRLLLQKRQFFHSHRVQPMALEQVLSDQDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFVRKQSVLADGHVPWACEAFSKLHGKELISSPTLFWCWRLFMIKLWNHGLLDAPTMNNCSIILDSFRNEGSDGGKN 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0459 463 MobiDBLite consensus disorder prediction 233 267 - -
Prci5g0459 463 CDD ZnB-Zn_EMF2-like 41 163 - -
Prci5g0459 463 MobiDBLite consensus disorder prediction 233 255 - -
Prci5g0459 463 CDD VEFS-box_EMF2-like 326 452 - -
Prci5g0459 463 PANTHER POLYCOMB GROUP PROTEIN 37 89 - -
Prci5g0459 463 Pfam VEFS-Box of polycomb protein 313 448 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0459 Prci-Chr5 6041628 6048899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0459 27 97 C2H2 Transcription Factor Family AT5G51230 50.704 2.06e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0459 - - pcin:129311384 927.161