LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci5g0446	ATGGGATCTCTCATCGCCGCCCCACTTCTCGATGCTTCGACCTCCACTGAGTCCGAAATCGCCTGGCACTTGGCGTCTCTTCTTCTATCCCTCGGTCACCCAGCTCATCCCGCCGACCTTGCTTCTCGATGCAATTTAGTCACTGCTTCCCCTGAGCTAGTTGAGTTCCTATGCTCGATCCCCGAATCTCCCATTTTGTTGACCTCCGATTTCCATGTCACTCTCTCTGCTGTTGCTATAGTCGCTGTTGGACGCTTTATCTCCGTAACCGATTTTTTTGGTAGTTCTTTTATACCTAGGTTTGGAATCAGAGTTTCCTCAACGGACGGTTGGGGAAATAGCTGTAGAAAACGGAAACGAAGGTTTATTTTAGAGTCTGATTTTCTTCCCGTGGCAAAAAGAGGGATAACTTGTCATTCTCAACATGATGAGTTGGATCAAATGAAGATGCTCAGTCCGAAGAGAATCTGCGATGATTCTTCTCGGATTATTCTTCAGTCAAATGGCGCTATAAGCATTGACTTACTCGAAAGTTCAGATCCGTGCAAGGTAATTGAAATGAAGGAGACTTTCGAAAGCAGGACAAGTGTCAATGGCGCATTTAAAGATCTTGAATCTACCAACATGCCTCCGTTGGTGGATGACACAATTAATTGCAATGAAGTAGGTCCAAACGTTAGAATAGGTGATAGCAAAATATCCTTGGAATGTCAGCAGACGTCGTGGTTAATGAGTTCCGGTGGCGCAAAGCCTCTTGGAAACATGATACAGCCATCAAATACCACTTGTTCAGAAATGCCGCTCAAAGGTGAAGCTGGAAGGATTCCTAATGAAAATCGTGATGAAGTTAACTATTTCAATGAAAAGTCAATGGCTGCAGATGTGAAAAATATGGACTTATCTGCGGATCCCCTTTCTTTACGCAAGTTTTCTCAATCCTCTTTGAAGACGAATGCCATGCCCAGCGATGCAACTGTTCCTAATCTGCAAGACGGGTCCAAAACTTCACAAAATGAAGAGAAACGGGACTTTTGTAGAGGTCAGGCATCATTGGGCAAGGGACAGAAAAAGAATTGCAGTGCCATGCATGTCAAGGAAAAAAGGGGAACTTCACACTCAACGTCTCCTGAGGATAAAAAGGAGCGTAAAGAGCTTCCAACATTTGAATCGTACATTGTAGAAGAGGAAGAAGGCTCAGGTGCTTATGGCGTTGTCTACAAGGCAAGGAGGAAGAGTGATGGAGCCACGGTTGCCATTAAATGTCCTCATGCTAAAGCTCACGGGCAATATGTTACTAACGAGCTGAAAGTGCTCGAACGATTTGGGGGGAAAAACTTTATAATTAAATATGAAGGCAGCTTCAAGAATGGAAATACTGATTGCTTTGTTCTAGAACATATCGAGCACGACAGGCCTGAGGTGTTAAGGAAAGAAATCGATATTGTTCAACTCCGATGGTATGGTTACTGCATGTTCAGGGCTCTAGCAACTCTCCACAAGCGGGGAGTAATCCACAGAGATGTTAAACCTGGCAACTTCCTTTTCTCCCGTAAGCTTAACAAAGGGTATCTGATTGATTTCAATCTTGCCAAGGATCTGCATCAGAAGCCAGGGAATATCACTTCAACCAAAGGCAGAAAGTTCTCCAATGTCAATTTTTTGGAAGCTACCAATCAGCAGACAACTAACGCCTCCAAGTCGATCTTAGATCCTAGGGAGAACAGAAGAAAGAGTGTAGTGCAACCAAAGACAAAAAATGACAGAGGTAGTGGGCAGCTAATGAAAAGTCAAGGTGCGGACGGCTCAGGAGTGACTTCAGCAAAGGATGTGACTAGCACAAGAACATCACTTGAAAAGAGACTGAGTCTGGTAAAACCAAGGAGGAAAGAGTTGATTAGCATTTTGCAAGAAACACTGTTAGGTCCAAATCAAGAACCATCAAACACTCCTATGAGAAAGCGAGTTCCTGCTCCTCGTAGTAAGATGGTGGGCGAGCACATCTACGTCTCTCCCATGCCATTGAACTCGATCGGCAATGATGTCACTGGTGCCGGATTTCTGCGGAGTAAAGGGAATGGAAAGCAGATAAGAGAAGGTTCTTGTGTCGGGACAAAAGGCTTTCGGGCTCCAGAGGTATTGTTCAGGTCTCCACATCAAGGTCCTAAGCTTGACATCTGGTCTGCCGGTGTATCCTTGCTCTATCTCGTAATTGGGAAGACTGCTTTCACTGGTGATCCTGAACAGAACATAAAGGATATAGCTAAATTGAGAGGCAGTGAGGATCTATGGGAGGTTGCTAAGCTACACAACCGGGAATCCTCATTCCCTGCGGACTTGTACGATAAACAAAGTTTGCCATCTTTGCGACTTCGAGATTGGTGCTCAATGAACACAAAGAGACCAGAGTTCCTAGAAGTCATTCCCGGTTCACTTTTTGATCTTTTAGACAAGTGCTTGATGGTGAACCCTAGACTGAGAATCGGTGCAGAGGAAGCTCTTCAGCATGAGTTTTTTGCTCCATGCCATGAGAGCCTGAGGAAGGAGAGGCAATGCAAGAAGGAATTCTAG	2568	0.4482	MGSLIAAPLLDASTSTESEIAWHLASLLLSLGHPAHPADLASRCNLVTASPELVEFLCSIPESPILLTSDFHVTLSAVAIVAVGRFISVTDFFGSSFIPRFGIRVSSTDGWGNSCRKRKRRFILESDFLPVAKRGITCHSQHDELDQMKMLSPKRICDDSSRIILQSNGAISIDLLESSDPCKVIEMKETFESRTSVNGAFKDLESTNMPPLVDDTINCNEVGPNVRIGDSKISLECQQTSWLMSSGGAKPLGNMIQPSNTTCSEMPLKGEAGRIPNENRDEVNYFNEKSMAADVKNMDLSADPLSLRKFSQSSLKTNAMPSDATVPNLQDGSKTSQNEEKRDFCRGQASLGKGQKKNCSAMHVKEKRGTSHSTSPEDKKERKELPTFESYIVEEEEGSGAYGVVYKARRKSDGATVAIKCPHAKAHGQYVTNELKVLERFGGKNFIIKYEGSFKNGNTDCFVLEHIEHDRPEVLRKEIDIVQLRWYGYCMFRALATLHKRGVIHRDVKPGNFLFSRKLNKGYLIDFNLAKDLHQKPGNITSTKGRKFSNVNFLEATNQQTTNASKSILDPRENRRKSVVQPKTKNDRGSGQLMKSQGADGSGVTSAKDVTSTRTSLEKRLSLVKPRRKELISILQETLLGPNQEPSNTPMRKRVPAPRSKMVGEHIYVSPMPLNSIGNDVTGAGFLRSKGNGKQIREGSCVGTKGFRAPEVLFRSPHQGPKLDIWSAGVSLLYLVIGKTAFTGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPADLYDKQSLPSLRLRDWCSMNTKRPEFLEVIPGSLFDLLDKCLMVNPRLRIGAEEALQHEFFAPCHESLRKERQCKKEF	855

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci5g0446	855	Gene3D	Transferase(Phosphotransferase) domain 1	363	550	-	-
	Prci5g0446	855	SMART	serkin_6	391	838	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci5g0446	855	MobiDBLite	consensus disorder prediction	314	334	-	-
	Prci5g0446	855	Gene3D	Transferase(Phosphotransferase) domain 1	679	855	-	-
	Prci5g0446	855	SUPERFAMILY	Protein kinase-like (PK-like)	388	845	IPR011009	-
	Prci5g0446	855	Pfam	Protein kinase domain	699	838	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci5g0446	855	Pfam	Protein kinase domain	393	538	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci5g0446	855	FunFam	Probable serine/threonine-protein kinase DDB_G0291918	383	549	-	-
	Prci5g0446	855	MobiDBLite	consensus disorder prediction	359	385	-	-
	Prci5g0446	855	ProSiteProfiles	Protein kinase domain profile.	391	838	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci5g0446	855	MobiDBLite	consensus disorder prediction	562	617	-	-
	Prci5g0446	855	MobiDBLite	consensus disorder prediction	314	385	-	-
	Prci5g0446	855	MobiDBLite	consensus disorder prediction	569	583	-	-
	Prci5g0446	855	PANTHER	OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED	368	851	-	-
	Prci5g0446	855	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	503	515	IPR008271	GO:0004672\|GO:0006468
	Prci5g0446	855	FunFam	Kinase like protein	679	849	-	-
	Prci5g0446	855	MobiDBLite	consensus disorder prediction	584	617	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci5g0446	Prci-Chr5	5955219	5961450	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci5g0446	679	838	Core Cell Cycle Gene Families	AT3G48750	31.361	2.40e-11	63.9

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	Group-Pl-2	Prci5g0446		Pkinase	2.6e-16	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci5g0446	K02214		-	pcin:129310665	1713.35