Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0441 ATGTCCTGCTCGTCGGAGAACTCGGAGGTTTCTGACCTGAAGCTGGCCAAGTCGTCGGAGCAGTCAGCCTTCTCTCAGACTTGTAGCCTGTTGAGTCAGTACCTCAAGGAGAAAGGCAGCTTCGGAGATCTTACTCTCGGAATGACATGCAACATCGAAGGCACCGGGTCTCCTGAGACATCTTGTCACTCTGCAACCATTAAGAACCTTCTTCCGACCAAGACTTCTGTGAATCCCTGTGTGATGAATCCTGTGAGTATGGAGCCTAAATCTGCACAGTTGACAATCTTCTATGGTGGACAAGTTCTTGTGTTTGATGATTTTCCAGCTGAAAAAGCCAAGGAGATCATGGCCCTTGCAGGCAAAGGAAACTCCCAAACTCTCAACAGATCTGCTTATGCTTATCCTTCATTTCCTCCTAATTTGGTCACAATTTCTGCTGATCCTAATGCTGCCGGCAATTTGGGTCAAGAGCACTCTCAAGCACAACCCAGACCTGTTATTGCTGATCTACCAATTGCTAGGAAAGCTTCACTTCATCGGTTCTTGGAGAAGAGAAAGGATAGAATCGCTGCCAGAGCTCCATATCAAACAAACAATGCCAAGAAGCCAGCTGAAGCCATGCCATGGATTGGCATGTCTCCTAATTCACCACTAGTCTGA 663 0.4721 MSCSSENSEVSDLKLAKSSEQSAFSQTCSLLSQYLKEKGSFGDLTLGMTCNIEGTGSPETSCHSATIKNLLPTKTSVNPCVMNPVSMEPKSAQLTIFYGGQVLVFDDFPAEKAKEIMALAGKGNSQTLNRSAYAYPSFPPNLVTISADPNAAGNLGQEHSQAQPRPVIADLPIARKASLHRFLEKRKDRIAARAPYQTNNAKKPAEAMPWIGMSPNSPLV 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0441 220 Pfam tify domain 88 121 IPR010399 -
Prci5g0441 220 SMART tify_2 87 122 IPR010399 -
Prci5g0441 220 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 205 IPR040390 -
Prci5g0441 220 ProSiteProfiles Tify domain profile. 87 122 IPR010399 -
Prci5g0441 220 Pfam Jas motif 172 197 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0441 Prci-Chr5 5845252 5847204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0441 1 214 Tify Gene Family AT1G19180 39.535 1.30e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Prci5g0441 tify 4.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0441 K13464 - gmx:100801449 244.588