Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0401 ATGAACGTCGAGAGTCCTCAGAGGAAGAAATTCAAGAAAATGAGCACTATGATCAGAACAGAGATCATATCTAGAAGATGTATCAAGCCAACCTCGCCGACACCCTCACACCTCAAATCCTTCAAGATCTCTCTTCTAGACCAGATCTCTCCTAACATCCATGGTAATATGACCCTCTTCTACTCTCCCAACGCCGCCGCTGACAGCGGCGCCGGAGATCTCCTCTCTCACTTTTCGGCCAAATCCCAACTTCTCCAAAACGCCCTCGCCGAAACGCTCACCCGCTTCTACCCTCTCGCCGGCCGCATCCGTGACACGGCCACCGTTGACTGCAACGATGACGGTGCCGTCTACATCGAAGCTCGAACGGACACTCGTCTTTCTGACTTCCTCAGCCACCCAGACTTCGACATTCTCGAACACTTCCTACCTTCCACCGACAAGGAAACCATGGAATTGTCAAACGGTTCCATGCTCCTCGTACGGTTCACATTGTTCGGTTGCGGTGGGACTGCCGTGAGCATATCCCTCACCCACAAGATCGCCGATATAGCAGCCTTGATCACAGTCCTTCAGAGCTGGACCGCTGCGTGTCGTGCACGTACTGAACCGGACGTTCCTGACTTGGGCCTCGGCGCTTCTCTCTTTCCTCCGCGAACCATCCTGGGGATGTCCGCATCTGTAAATATCGCCGCCGAGAAGTTCACAGCAAGACGGTTCGTTTTCACCGGCTTCAAAGTCGGAGAGCTCAAGAGCAGAGTGGCAACTTCACTCGGAAGAGACAAATCCGACGATGAGGACATTGATCAGTTCCACCCGTCGCGAGTGGAAGTCGTGCTAGCTCTGATATGGAGATGCGCGATGTCGGCTTCCCGTTCCAAAACGGGGTCGTTTAAGCCGTCGGCTCTGTTCCAAGCCGTGAACCTTCGTCCCCGTATGGAGCCACCGGTGCCGGGGACGGCCATCGGGAACTTCGTGTGGCCGTTTGCGGTGACGGTGGAGGAAGAGAAGGAGTTGGACTTACATGCTCTGGTAAAGAAGATGAGGGAAGGGATAAAGGACTTCATAGAGAAGAAGGCAATCAAGTTCAAAGAAGGAGGTGGGTTTGAAGCAGTAATGGAGTTTCTGAAGGAGAGGGGAGAGATGTTGAAGAAGAAGAAGGAGACAGTGGTTTACAAGTGTTCGAGTTGGTGTAGGTTTCCATTGTACGACGTGGACTATGGCTGGGGGAATCCAGTGTGGATGTCAAGCGTGAATAAGATGGTGAGTAACACAGTGGCTTTAATGGATGTGAAGGATGGTGGAGTTGAAGCTCTGGTGACTTTGAACGAACAGGAAATGGATATCTTCGAACAACATCATGAGTTGCTTCAATATGCTCAGCTCAATCCTAGTATTGATATTTGA 1407 0.5174 MNVESPQRKKFKKMSTMIRTEIISRRCIKPTSPTPSHLKSFKISLLDQISPNIHGNMTLFYSPNAAADSGAGDLLSHFSAKSQLLQNALAETLTRFYPLAGRIRDTATVDCNDDGAVYIEARTDTRLSDFLSHPDFDILEHFLPSTDKETMELSNGSMLLVRFTLFGCGGTAVSISLTHKIADIAALITVLQSWTAACRARTEPDVPDLGLGASLFPPRTILGMSASVNIAAEKFTARRFVFTGFKVGELKSRVATSLGRDKSDDEDIDQFHPSRVEVVLALIWRCAMSASRSKTGSFKPSALFQAVNLRPRMEPPVPGTAIGNFVWPFAVTVEEEKELDLHALVKKMREGIKDFIEKKAIKFKEGGGFEAVMEFLKERGEMLKKKKETVVYKCSSWCRFPLYDVDYGWGNPVWMSSVNKMVSNTVALMDVKDGGVEALVTLNEQEMDIFEQHHELLQYAQLNPSIDI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0401 468 PANTHER F21J9.9 21 460 - -
Prci5g0401 468 Gene3D - 232 461 IPR023213 -
Prci5g0401 468 Pfam Transferase family 21 456 - -
Prci5g0401 468 Gene3D - 18 224 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0401 Prci-Chr5 5324129 5325783 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0401 18 452 Monolignol Biosynthesis Gene Families AT5G48930 22.489 2.65e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0401 - - pcin:129311859 934.48