Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0398 ATGGGAGGTGGATTTTCCAAATTCTGTTCCTGCTTTGAACCGCTAAACAGGACGGCGACGACGAGCCAACCGGACCAGCAGGATGGGATTTCTGCGCCGACTGAGCCTTTGGACGGAACTATAGGCCACTCCTTCCGATATGTCAGATCTTCATCTCGCTTGCTTTCACGCGGTCACTCGGATCGCGACGTCTTTCCTTCTAATTCCCTCCGCTTCTCTCCCTTCCATGAACCCGTTATCAGAGTCCGACCCGATTTCCCGGAAACTGGATTCAAGGCCATTTCCGGAGCTTCGGTGAGTGCTAACCATTCGACTCCGAAAACTGTTGTCCACCTGGAAGACGTCTGCGATGGAGCCAATGATGGTACCACTCCTGAAGGTGGCGTGAGGGGAAGTATTGTGAATGGGTTCGAAAGCACATCTTCGTTTAGTGCTCTTCCGCTTCAGCCGGCGCCGAGAGGAGAGCCTCACTTTCTCTCAGGTCCAATTGAGCGTAGTGCTCTCTCTGGGCCTCTTGAGCAAAACAACGCCACCGCAGAAGATGAAAGCGAGGTCCCTTTTTCGGCTCCTCTGGGTGGCTTTTATACCAAAGAGAAGCGCAAGAGAGCGTTTTCACGGTTGCGTAAGGCATTTCATCCGGCCAGTTCGGAGAAGCAGCAGCCAGGAGCGGTTTCGGTGTTGGATTTCGTGGGCAGAAAGGAAGCTCCGGCGAACGAAGAGAAGCCGGAAGTGAAGAGTGAGAGTAGTCATGTTCAATGGGCGCTTGGGAAAGCAGGAGAGGATCGGGTACATGTGGTTGTATCAGAAGAGCATGGCTGGCTGTTCATCGGCATTTACGACGGCTTCAATGGCCCTGACGCGCCGGAATTCCTAATGTGCCATCTTTATCGTGCTGTTTACAATGAACTAAAAGGTTTGTTCTGGGAAGCTGAAGGCGCAAAGGAAACCAATCCATCAACTTCTGAAAACACCATGATTGGCGTAGAAGAGCTCAAAACTGAGAGTGAAATTTCAGTGTGCGTAGAAGATGCAAATCCCCTGATTTTTCAAGCTGAAGATAGGCGACGCAGGCTATGGGAATTTCTTGAAGACGACGATCCAGAAGACGGTCTCGATCTCTCAGGGTCAGAAAGATTTGCATTTTCCGTCCATGATGCAATCAACGTCAGAAATGCGGGATCAGCAGTTAGTAGACGGTGGCTGCTATCAAAACTGAAGCATGGATTATCAAAACCCAAGAGGGTCCATGGTGGTAAGTTGTCATCGTCGATACAATATCATCAAGAGAAGGTTGGAGCGGAGAAAGAGAAGTCTTCTGGTGGAGGAAGGAAGAGAAAGGTGGGCCCCGTGGATGCTGACTCAGTGTTGAGGGCATTGTCTCGGGCTCTTGAAGCCACCGAACTTGCATATTTGGACATGACAGACAAGCTTCTGGATTCAAATCCAGAACTCTTTTTAATGGGGTCGTGTCTGTTAGTTGTTTTAATGAGGGACGAGGATGTGTACGTGATGAACGTAGGAGATAGCCGAGCCATTGTTGCGCAATACGAGCCCAGAGAGTTAAAATCTGCAACGGAATTGAGTTATGAGGGAAATAATAATGAGTCAAGCACAGAGAGCGTAACTGAGGAATTCTTAGCTGGAGATGAAAGAGCAATCAAGTTGGAGAATGAGGATCCTGGTCAAGAAATGAGGCTAGTTGCATTACAGCTTTCCACAGACCATAGCACCAGCATTGAAGAGGAAGTGATCAGAATCAAGAATGAACATCCTGATGATAGCCACTGCATTGTCAATAACAGAGTGAAAGGTCATCTTCAGGTCACCAGAGCATTTGGGGCAGGATTTTTGAAGCAGCCAAAGTGGAATGATGCAGTGCTGGAAACGTTCCGTGCAGATTATATTGGCACTGCTCCATATATATCCAGCTCTCCGTCACTATGCCACCATAGATTAAGCCAAAGAGATCAGTTCTTAATCCTTTCATCTGATGGATTGTATCAATATCTAACAAATGAAGAAGTGGTTTCTCAAGTTGAGAACCTGATGGAGAACTGTCCAGATGGAGATCCAGCCCAGCATTTGATAGAACAGCTACTCCTTCGCGCAGCCAAGAAGGCTGGAATGGATGTGCATGAGTTGCTTGATATTCGACAAGGAGATCGGAGGAAGTACCATGATGATGTTACTGTTATGGTGATATCACTTGAAGGCAGAATATGGAAATCATCTGGGAAGTATCTGTGA 2247 0.4802 MGGGFSKFCSCFEPLNRTATTSQPDQQDGISAPTEPLDGTIGHSFRYVRSSSRLLSRGHSDRDVFPSNSLRFSPFHEPVIRVRPDFPETGFKAISGASVSANHSTPKTVVHLEDVCDGANDGTTPEGGVRGSIVNGFESTSSFSALPLQPAPRGEPHFLSGPIERSALSGPLEQNNATAEDESEVPFSAPLGGFYTKEKRKRAFSRLRKAFHPASSEKQQPGAVSVLDFVGRKEAPANEEKPEVKSESSHVQWALGKAGEDRVHVVVSEEHGWLFIGIYDGFNGPDAPEFLMCHLYRAVYNELKGLFWEAEGAKETNPSTSENTMIGVEELKTESEISVCVEDANPLIFQAEDRRRRLWEFLEDDDPEDGLDLSGSERFAFSVHDAINVRNAGSAVSRRWLLSKLKHGLSKPKRVHGGKLSSSIQYHQEKVGAEKEKSSGGGRKRKVGPVDADSVLRALSRALEATELAYLDMTDKLLDSNPELFLMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYEPRELKSATELSYEGNNNESSTESVTEEFLAGDERAIKLENEDPGQEMRLVALQLSTDHSTSIEEEVIRIKNEHPDDSHCIVNNRVKGHLQVTRAFGAGFLKQPKWNDAVLETFRADYIGTAPYISSSPSLCHHRLSQRDQFLILSSDGLYQYLTNEEVVSQVENLMENCPDGDPAQHLIEQLLLRAAKKAGMDVHELLDIRQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0398 748 SMART PP2C_4 244 734 IPR001932 -
Prci5g0398 748 ProSiteProfiles PPM-type phosphatase domain profile. 245 736 IPR001932 -
Prci5g0398 748 MobiDBLite consensus disorder prediction 163 185 - -
Prci5g0398 748 MobiDBLite consensus disorder prediction 19 38 - -
Prci5g0398 748 CDD PP2Cc 451 736 IPR001932 -
Prci5g0398 748 MobiDBLite consensus disorder prediction 426 448 - -
Prci5g0398 748 MobiDBLite consensus disorder prediction 429 448 - -
Prci5g0398 748 Gene3D - 231 743 IPR036457 -
Prci5g0398 748 SUPERFAMILY PP2C-like 253 737 IPR036457 -
Prci5g0398 748 Pfam Protein phosphatase 2C 548 702 IPR001932 -
Prci5g0398 748 PANTHER PROTEIN PHOSPHATASE 2C 238 735 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0398 Prci-Chr5 5284851 5289776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0398 1 748 PP2C-type Phosphatase Gene Family AT2G35350 53.433 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0398 - - pcin:129312184 1472.22