Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0394 ATGGAGTGGTTTTTCTTCTGTCCACGAGATCGAAAGTACCCAAATGGATCGCGAACAAATAGAGCTACCAAAACTGGGTACTGGAAAGCCACTGGAAAAGACAGAAATATAGAGTGTCAGTCAACCCCATTCACTGTTAAAGGATGTAGAAAGACTCTTGTTTTCTATCGTGGAAGAGCTCCACTTGGGGATCGAACTGAGTGGATCATGCATGAGTATCGACTCAACAATGACTCTGATCACTCATCTCCCAGTTTTCAGGGTGGTTTTGCCTTGTGTAGGGTGATGAAGAAGAATGAGAAGGTTAAGAGTTCGCAGGAAGAACAAAAAGGTAAGGTAGCAGGAAGCAGTTGCACCGGTGGGAATAAAGAAGCTTCAATGAAGACCTTTGGTGATGTATCGTCTCAATCAAGCCCCAACACTTCTTGTCCATACCATGTGGCTTCAACCATGGCAGAGCCTGAGCAAGCTTCTTCCTTGGAGTCCATCAACCCTTCACATTTTTATGTCTCGCCTGACTTGATTCTGGATTCTTCCAAGGACTACCCTCAAGTACAGGATGCCATGTCTGGATACTTTCCACAGTACGACTTATCATGTTCAATGAATCCATGGCAATCATTCCTACCAACAGAAAATTCAACCTCCTCATCTTACTCAAATGTAAATGGAGAAATTGAATTTGCTGAAGATCTCGATCAAGTTGGCTACTTCTATAGAAATGAAGATGTATCTCACGAAGGCTTTGATCATATCAATTCACTCAGATATCCAAAACCGTTCTGA 786 0.4275 MEWFFFCPRDRKYPNGSRTNRATKTGYWKATGKDRNIECQSTPFTVKGCRKTLVFYRGRAPLGDRTEWIMHEYRLNNDSDHSSPSFQGGFALCRVMKKNEKVKSSQEEQKGKVAGSSCTGGNKEASMKTFGDVSSQSSPNTSCPYHVASTMAEPEQASSLESINPSHFYVSPDLILDSSKDYPQVQDAMSGYFPQYDLSCSMNPWQSFLPTENSTSSSYSNVNGEIEFAEDLDQVGYFYRNEDVSHEGFDHINSLRYPKPF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0394 261 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 156 - -
Prci5g0394 261 Gene3D NAC domain 1 103 IPR036093 GO:0003677|GO:0006355
Prci5g0394 261 SUPERFAMILY NAC domain 2 98 IPR036093 GO:0003677|GO:0006355
Prci5g0394 261 MobiDBLite consensus disorder prediction 101 121 - -
Prci5g0394 261 Pfam No apical meristem (NAM) protein 2 75 IPR003441 GO:0003677|GO:0006355
Prci5g0394 261 ProSiteProfiles NAC domain profile. 1 98 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0394 Prci-Chr5 5279362 5281357 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0394 1 253 NAC Transcription Factor Family AT4G17980 44.656 5.95e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci5g0394 NAM 2.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0394 - - gmx:100796849 317.775