Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0392 ATGATTCTGACATACAAATCATTCCTCCCAAAGAGAGATATGGAGTGGTTTTTCTTCTGTCCACGAGATCGAAAGTACCCAAATGGATCGCGAACAAATAGAGCTACCAAAACTGGGTACTGGAAAGCCACTGGAAAAGACAGAAATATAGAGTGTCAGTCAACCCCATTCACTGTTAAAGGATGTAGAAAGACTCTTGTTTTCTATCGTGGAAGAGCTCCACTTGGGGATCGAACTGAGTGGATCATGCATGAGTATCGACTCAACAATGACTCTGATCACTCATCTCCCAGTTTTCAGGGTGGTTTTGCCTTGTGTAGGGTGATGAAGAAGAATGAGAAGGTTAAGAGTTCGCAGGAAGAACAAAAAGGTAAGGTAGCAGGAAGCAGTTGCACCGGTGGGAATAAAGAAGCTTCAATGAAGACCTTTGGTGATGTATCGTCTCAATCAAGCCCCAACACTTCTTGTCCATACCATGTGGCTTCAACCATGGCAGAGCCTGAGCAAGCTTCTTCCTTGGAGTCCATCAACCCTTCACATTTTTATGTCTCGCCTGACTTGATTCTGGATTCTTCCAAGGACTACCCTCAAGTACAGGATGCCATGTCTGGATACTTTCCACAGTACGACTTATCATGTTCAATGAATCCATGGCAATCATTCCTACCAACAGAAAATTCAACCTCCTCATCTTACTCAAATGTAAATGGAGAAATTGAATTTGCTGAAGATCTCGATCAAGTTGGCTACTTCTATAGAAATGAAGATGTATCTCACGAAGGCTTTGATCATATCAATTCACTCAGATATCCAAAACCGTTCTGA 825 0.4242 MILTYKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKTGYWKATGKDRNIECQSTPFTVKGCRKTLVFYRGRAPLGDRTEWIMHEYRLNNDSDHSSPSFQGGFALCRVMKKNEKVKSSQEEQKGKVAGSSCTGGNKEASMKTFGDVSSQSSPNTSCPYHVASTMAEPEQASSLESINPSHFYVSPDLILDSSKDYPQVQDAMSGYFPQYDLSCSMNPWQSFLPTENSTSSSYSNVNGEIEFAEDLDQVGYFYRNEDVSHEGFDHINSLRYPKPF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0392 274 Gene3D NAC domain 3 116 IPR036093 GO:0003677|GO:0006355
Prci5g0392 274 MobiDBLite consensus disorder prediction 114 134 - -
Prci5g0392 274 Pfam No apical meristem (NAM) protein 12 88 IPR003441 GO:0003677|GO:0006355
Prci5g0392 274 SUPERFAMILY NAC domain 10 111 IPR036093 GO:0003677|GO:0006355
Prci5g0392 274 ProSiteProfiles NAC domain profile. 1 111 IPR003441 GO:0003677|GO:0006355
Prci5g0392 274 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0392 Prci-Chr5 5279354 5281357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0392 6 266 NAC Transcription Factor Family AT4G17980 45.926 1.83e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci5g0392 NAM 2.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0392 - - gmx:100796849 334.339