Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0378 ATGGCTGGTCTGGATTTAGGCACTGCTTCTCGTTTTGTTCCAAATCTCCACAGACCTAACTTGCACCTTCAGCAGCAGCATCAACATCAGCAACGCGAATCCGAGGAAGATGTGCATCGGGCCGATCCCTTTTCTGGCGACGACGGTCCCCACCAAGGCCTCGAGCTTGTCTCCACAGGACCCGGCGACATCGTGGGCCGTCGACCACGTGGACGGCCACCGGGCTCCAAGAACAAGCCCAAACCGCCCGTCATAATAACCAGAGAGAGTGCCAACACCCTCCGAGCTCATATTCTTGAAGTCGGCAACGGGTGCGACGTGTTCGACTGTGTCGCCACCTACGCTCGCCGGAGGCAGCGAGGGATCTGTATTCTAAGCGGGAGTGGCACGGTGACAAATGTCACCCTAAGGCAGCCTGGAGGTGCTGGAGCTGTTGTGAGTCTCCACGGCAGGTTTGAGATATTGTCGTTATCGGGATCGTTCCTACCGCCTCCGGCGCCGCCCGGTGCGACCAGCCTGACGATATACTTGGGCGGAGGGCAAGGGCAAGTGGTCGGAGGAAGCGTGGTGGGGGAGCTGAGGGCGGCAGGTCCGGTGATCGTGATCGCTTCTTCGTTCACGAACGTGGCGTACGAGAGACTCCCGTTGGACGATGAGGAGCAGGAGCAGCTTCAGATGCATACCCCTGGATCCACTCAGGGGGGTTCTGGCGGCGGCGGAGGGAATAACTCGTATCCTGACCCGTCTTCCGGTCTACCTTTCTTCAATTTGCCGCTTAATATGCCGCCGCCGCCGCATCAGCAGCAGCAGCAGCACAATGTTCAGTTGCCGGTCGACGGTTGGACCGGAAGCTCCGGTCCGCGTCCGTCCTTTTAA 876 0.5947 MAGLDLGTASRFVPNLHRPNLHLQQQHQHQQRESEEDVHRADPFSGDDGPHQGLELVSTGPGDIVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDCVATYARRRQRGICILSGSGTVTNVTLRQPGGAGAVVSLHGRFEILSLSGSFLPPPAPPGATSLTIYLGGGQGQVVGGSVVGELRAAGPVIVIASSFTNVAYERLPLDDEEQEQLQMHTPGSTQGGSGGGGGNNSYPDPSSGLPFFNLPLNMPPPPHQQQQQHNVQLPVDGWTGSSGPRPSF 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0378 291 MobiDBLite consensus disorder prediction 28 46 - -
Prci5g0378 291 PIRSF ESCAROLA 9 291 IPR014476 GO:0003680
Prci5g0378 291 ProSiteProfiles PPC domain profile profile. 91 227 IPR005175 -
Prci5g0378 291 MobiDBLite consensus disorder prediction 23 84 - -
Prci5g0378 291 CDD DUF296 95 170 IPR005175 -
Prci5g0378 291 Gene3D - 94 230 - -
Prci5g0378 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 241 IPR014476 GO:0003680
Prci5g0378 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 225 - -
Prci5g0378 291 FunFam AT-hook motif nuclear-localized protein 94 221 - -
Prci5g0378 291 MobiDBLite consensus disorder prediction 266 291 - -
Prci5g0378 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 208 IPR005175 -
Prci5g0378 291 MobiDBLite consensus disorder prediction 220 291 - -
Prci5g0378 291 MobiDBLite consensus disorder prediction 225 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0378 Prci-Chr5 5139094 5140619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0378 1 291 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 63.091 3.24e-98 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0378 - - qsa:O6P43_024484 353.984