Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0377 ATGGGTGCAGAGATTGGCCTTCTCTCCATGACCCAGATCCAAAAATTGTCACAATCCCAACACCTCCACCACCACCACCCCAATCTTCTTCCCACCACCTGGATCATGTGGAACCCTAGGCATCCCCAGGAAGAAGATGACTCGTGGGAGGTCAGAGCCTTTGCGCAGGACACCACAAGCATCATGGGCACCACTTGGCCTCCCAGGTCCTACACCTGCACTTTCTGTAGAAGGGAGTTCCGTTCAGCCCAAGCTCTCGGCGGCCACATGAACGTCCACCGCCGTGACCGTGCCCGACTTCACCACCACCAGCAACAACGACCTCCACCTGCATCTGCTGCTGCTTCAGTTCAGAGCAACCTCATCTCAGCTCATCATCATCATCAAGGCAGATTCTTCCTCTATCATTTGCCGAGCCCTGACGGGATTGGAAACTTGTCTGGTACTAATACTAGTAATACTGCTAATACTCTTGCTTCTTCTTTGAATGCATGTAGAGAATCATTATCTCCAACCACGCTTCTCTCCATTATGCCCTATCCACCAAGCAACTTGGTGTCAACTAATACTAGCTCCGCCTCCTACGATTTTCAAGTGGAGCGGCGGCCTGCAGTATTCACCAATTCTTCTTTCTGTGATTCCACCAAAGTGGAACAAACCGCGACCTCGTCCTTTGCCGGCAACAGGCACGAGGAGCTTGATCTCGAGCTCCGGCTGGGGCACACACCACCAACACCTAGCAGAAATCAAAAACGGTGTGCGTGA 765 0.5229 MGAEIGLLSMTQIQKLSQSQHLHHHHPNLLPTTWIMWNPRHPQEEDDSWEVRAFAQDTTSIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHHHQQQRPPPASAAASVQSNLISAHHHHQGRFFLYHLPSPDGIGNLSGTNTSNTANTLASSLNACRESLSPTTLLSIMPYPPSNLVSTNTSSASYDFQVERRPAVFTNSSFCDSTKVEQTATSSFAGNRHEELDLELRLGHTPPTPSRNQKRCA 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0377 254 ProSitePatterns Zinc finger C2H2 type domain signature. 73 93 IPR013087 -
Prci5g0377 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 71 98 IPR013087 -
Prci5g0377 254 PANTHER OS07G0101800 PROTEIN 43 243 - -
Prci5g0377 254 Pfam C2H2-type zinc finger 71 95 - -
Prci5g0377 254 SUPERFAMILY beta-beta-alpha zinc fingers 68 98 IPR036236 -
Prci5g0377 254 SMART c2h2final6 71 93 IPR013087 -
Prci5g0377 254 Gene3D Classic Zinc Finger 57 129 - -
Prci5g0377 254 MobiDBLite consensus disorder prediction 98 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0377 Prci-Chr5 5095169 5095985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0377 36 244 C2H2 Transcription Factor Family AT4G17810 40.278 5.58e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0377 - - zju:107430492 192.971