Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0372 ATGGAATCGATGGAGGAATCATGGGAAGGCTGGTTCCAGGATTTGGAAATAGCTGGTGACTTCATGAGTTTCGCTTTTGGGGCTGATCATGAATTTGGTAATTCATCCTCACAGGAGAACTTTGATACAGAGACCTTTAACGCCGGCGAAAACGGCGTCATCATCACGAGCAATCCTTCAAGTTCAAAATCTGTGAACGCCCCACATCTCACGGCTTCGAATTCCCATCTGTACGCTCATCATCAAGTCGATTCTGTCTTCATGCTAGAAGACAAGGCTTCTTTTGATGATCCTTTGAAAACGTACTTTGAGAGTCAAAGAAATATTAAAGAAAGAGAGATGTCGTCGGAGGGTAGAAATAGAAATCCTCGAGTACAAGATCACTTAATTGCTGAGAGAATGAGGAGAGGAAAGATCTCGCAGCACTTCATTGCTCTTTCAGCCCTAATTCCTGGCCTCAAAAGGGCGGACAAGGCGTCTGTGCTGGAGGGAGCTATAAACCACGTGAAGCAGCTTCAAGTGCAAGTTAAAATGCTGGAAGATCAACAGACCAATAAGAAGAAGAAAGCCAGAGAATCTGTGGTGTTTGTGAAGAAATCTCAGCTGATCTCTATGGATGATCATGACCATGTGACAGACATGGCGTTGAATCATTCATCATCGGACACTGAGAACTCCCATGATGTTGCCACCAAATGTAATAGAACAGTAGCAGACGCGGATGTGGAAGCAAGGGTTTCAGACAAGAATGTGTTGATTCGAATCCAATGCGAGAAACAAGAAGGAATAATGGTGAAGATGATGATGGAGATAGAAAAACTTCACTTGTCTATGGTAAATAGCAGTGTCGTGCCGTTCGGGAGATCCATTCTGGACATCACCATCATTGCTGAGATGGAGGATGAATTCAACTTGAGCGTGAAAGAGCTCGCTAGAAATCTCAGGGTAGCACTCTTGCGATCAACATAA 969 0.4407 MESMEESWEGWFQDLEIAGDFMSFAFGADHEFGNSSSQENFDTETFNAGENGVIITSNPSSSKSVNAPHLTASNSHLYAHHQVDSVFMLEDKASFDDPLKTYFESQRNIKEREMSSEGRNRNPRVQDHLIAERMRRGKISQHFIALSALIPGLKRADKASVLEGAINHVKQLQVQVKMLEDQQTNKKKKARESVVFVKKSQLISMDDHDHVTDMALNHSSSDTENSHDVATKCNRTVADADVEARVSDKNVLIRIQCEKQEGIMVKMMMEIEKLHLSMVNSSVVPFGRSILDITIIAEMEDEFNLSVKELARNLRVALLRST 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0372 322 Gene3D - 120 195 IPR036638 GO:0046983
Prci5g0372 322 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 123 172 IPR011598 GO:0046983
Prci5g0372 322 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 126 188 IPR036638 GO:0046983
Prci5g0372 322 Pfam Helix-loop-helix DNA-binding domain 126 173 IPR011598 GO:0046983
Prci5g0372 322 Coils Coil 162 189 - -
Prci5g0372 322 PANTHER BHLH TRANSCRIPTION FACTOR 26 319 - -
Prci5g0372 322 SMART finulus 129 178 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0372 Prci-Chr5 4999487 5001068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0372 126 318 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 47.449 2.45e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci5g0372 HLH 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0372 - - pcin:129310385 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0372 5 4999487 5001068 Prci5g0372 5 4999487 5001068 ECH