Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0370 ATGAAAGCCTCTCTCGCTTCTTCCTCCGACGAAGCCACCACTCTCAAGATGATCATTTCGTTTGCTGCATCGCTCCCTAATGGAGAAGAGGAAGGTTTCTTCTATGGAGTTAACATGAGAAGCACAAACTTCTTGATCTTGTGTGCTCGTCTCAGAGGAAAGAACAGCCACGTCTCTGATTTAGACAGAGAAGAAATCTCCTTCCCTCCTGATCTCCTGGATGCAGCTAGACAGGGAATGGAGGACCTGACATTGTGTGAGGAGTTCCCGATGGATTGTTTTGATGGACTTGATTTCCAATCCTTGGTCCCCGAGAGCTATTCACCTTACGAGCGTCCAAACTCCCAGAGAAAACAGAATCCTCAGTCAATTATTGCCCCCCCAGGACCAAGTCCGAGCAAGAAGGTCAAGGTCATCAATAAGTCTGTTGCTCCCAGACTCATTTCTTTTGAGCACTCCAATAATACGCACCAGTTATGCGATCTGGATCCCAATGTGAAGCTCGAAAGCCTCAGTGAAAACGTACTGAATCTGGCGTCTTTAAGAAGCTGTCAAGGCGCATACTATGAAGGTATAGATTTCGTAGAAGGCAAGAAAGAGACGAGAAATCCACTCCAAGCTCAAGATCACGTCATGGCCGAACGAAGACGAAGGGAAAAGCTCAACCAGAAGTTTATTACTCTCTCCTCCATCATTCCTGGCCTCAAGAAGATGGACAAGGCGTCGGTGTTGGGAGATGCTATAGAGTACGTGAAACAGCTGAAGGAACGCGAGAAGATTCTGGAAGAACAAGTTGCTATGAATAGAAAGGAATCCGCAGTCTTGACGAGGAGAACTATTCTCTTTGCGGACGATGATGATAAGTCGCCGCCGTCCGATGAAATTCCCGACAAGTCACTGGCTGAAATCGAAGCCAGAGTTTTGGGTAAAGATGTACTCATCAGAATCCAATGCGAGAAACATAATGGGTGTGAGGCTAAAATACTGAGAGAATTTGAAAACCTTCGTCTCACTGTTCATAGCAGCAGCATCCTACCATTTGGAGAAACCACCCTTTGTATAACCATCATCGCTCAGCAGATGGACAAGGAGCACAGCATGACAGCAAAGGATCTCGTGGGAAGCTTGAGGAAGGCATTGACATTAGATCGTGCGTAG 1158 0.4663 MKASLASSSDEATTLKMIISFAASLPNGEEEGFFYGVNMRSTNFLILCARLRGKNSHVSDLDREEISFPPDLLDAARQGMEDLTLCEEFPMDCFDGLDFQSLVPESYSPYERPNSQRKQNPQSIIAPPGPSPSKKVKVINKSVAPRLISFEHSNNTHQLCDLDPNVKLESLSENVLNLASLRSCQGAYYEGIDFVEGKKETRNPLQAQDHVMAERRRREKLNQKFITLSSIIPGLKKMDKASVLGDAIEYVKQLKEREKILEEQVAMNRKESAVLTRRTILFADDDDKSPPSDEIPDKSLAEIEARVLGKDVLIRIQCEKHNGCEAKILREFENLRLTVHSSSILPFGETTLCITIIAQQMDKEHSMTAKDLVGSLRKALTLDRA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0370 385 Gene3D - 1 19 - -
Prci5g0370 385 SMART finulus 211 260 IPR011598 GO:0046983
Prci5g0370 385 Pfam Helix-loop-helix DNA-binding domain 208 255 IPR011598 GO:0046983
Prci5g0370 385 Coils Coil 251 271 - -
Prci5g0370 385 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 205 254 IPR011598 GO:0046983
Prci5g0370 385 Gene3D - 206 276 IPR036638 GO:0046983
Prci5g0370 385 Pfam Hexokinase 1 75 IPR022672 GO:0005524|GO:0005975|GO:0016773
Prci5g0370 385 Gene3D - 20 75 - -
Prci5g0370 385 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 280 IPR036638 GO:0046983
Prci5g0370 385 MobiDBLite consensus disorder prediction 108 135 - -
Prci5g0370 385 MobiDBLite consensus disorder prediction 108 124 - -
Prci5g0370 385 SUPERFAMILY Actin-like ATPase domain 1 73 IPR043129 -
Prci5g0370 385 PANTHER BHLH TRANSCRIPTION FACTOR 106 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0370 Prci-Chr5 4964753 4968759 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0370 76 381 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.991 8.54e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci5g0370 Hexokinase_1 1.2e-07 CL0108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0370 - - pcin:129311489 558.525