Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0366 ATGGAACTTCTTGTTGTCAGTCGTTTATCATTTTTACTAGTAGTACTATTTTCTTCTCTACTGTGCTTGTGTCATTTCTCATGGCAGGCTTCTTTAGTGGGTGATTCTGAGATTCTTCTGCGGGTTAAGACTACTCAGATCGTTGATGAGAATGGCAGCCTCAAAAATTGGGACCGAGGCCTCCATTCCTGCAACTGGACTGGCATTACCTGTGATGACCTCAATCGCTACATTGTCGCCATTGACATCTCTAGCACTGGCATTTATGGTGGATTCCCGTTTGGCTTTTGTCGTATTCGGACCCTGCGACGGCTTTCTGTTGCGCAGAATTATCTTGGTGGCGTTGTCTCTCCTCAATCTCTCCTTCTCTGTTCTCACCTTCTTGTCTTGAACCTCTCTGATAACTTATTTGTCGGCGAGTTGCCGGAATTCTTGTCGGAGTTCTCTGAACTGATACGGCTTGATTTCTCGCGTAACAACTTTACAGGCGATATTCCGGCTAGTTTTGGTCGGCTACCACGTCTCAGGGTGCTCAGTTTGTCCTCGAACCTGCTCAACGGAACCGTTCCCCCGTTCTTGGGCAATCTCAGTGAGTTAACCCGATTGGAACTCGCTTATAATCCGTTCAGGCCAGGACCTTTACCCTCCCAACTTGGAAATTTATCGAACCTCGAAGTTATGTTCCTTGCGGGTTCAAATGTCGAAGGGAGTATACCGGACTCGATAGGGAAGCTGGTCTCACTCAAGAACTTGGACTTGTCACAGAATTTCTTGTCAGGTAAGATTCCAGATAGCATTTCGGGTTTGACAAGTGCGGAACAAATTGTCCTATTTCAAAACCAATTGTCAGGGGAAATTCCTAGAGGTTTCGGAAACCTTACCAGTTTGATTAGTTTAGACCTCTCTCAAAACAATCTCTCAGGGAAATTGCCGGATTCACTCTCTGCCTTGCATCTCCATTTTCTATCCTTGAACGACAATTTCCTCGAAGGAGAAATCCCAGTGAATGTAGCTAAAAATCCAAATTTGCTGACACTAAAACTCTTCAATAACAGCTTTACTGGGAAATTACCGGAAGATCTCGGTCGAAACTCTGATTTACAGGAGCTTGATGTTTCTACCAATGACTTTGTAGGCGAGTTGCCTAAGTACCTCTGCGAAAGGAACAAGTTGCGGCGCCTTGTCACATTCCGGAATCGCTTTTCCGAATCTCTCCCTGAGCAGTATGGTGACTGTCATTCACTCGACTATGTTAGAATCCAGCACAACCAGCTCTCTGGTGAGGTGCCTCCACAATTCTGGAAACTTCCTGGCCTTGAATTTCTACAAATGAATAACAACTTGTTCGAAGGTTCAGTCTCCATCTCTGGCGCTCAGAGACTCTCCGTACTGCGTGTATCCGATAACAGGTTTTCTGGACATTTCTCGGCGGAAATTTGTGAACTCCACGATATTAACGAAATTGACGTCGGCCGAAACCGGTTTACCGGTGATGTTCCGTCATGTGTAACTGGATTAAACAAGTTACAGAAGCTCAGCGTGCAGGAGAACATGTTCACCGGCCCGATTCCTCGTAACGTGAATTCCTGGACTGACTTGACCCTATTGAACTTGTCGTATAACCAATTCTCAGGTACGATCCCACCAGAGCTTGGTAATTTGCCAGATTTGATTTCTCTTGATCTCGCCATGAATTTCCTGACTGGGGGAATTCCGCCTGAGTTAGCAAAACTCAAGCTCAGCCAGTTCAACGTGTCAGGAAACAAATTGTCCGGAAATGTGCCTTCAGGGTTCAACAATGAATTCTATTTGCCGGGTCTTGTCGGTAATCCGAACCTCTGCAGCGAAGTCACGAAATTCCTTCATCCTTGTTCAAAATCTAGACACTTATCTTCGATAGCTATTATTGTGTTATCTACCTTCGTTGTACTCCTCCTTGGGTTTCTCCTCTTGTTCCTTAAGCGCAAGAAGTCACTATTTTCAACTGGCAAATCCAAGCGCTCTTTTAAGACAACGACATTCCATATGGTGGGCTTTAAGGAAGAAGATGTTGTTCCATTGTTAACCAGCGAGAATCTCATTGGCACAGGGAGTTCGGGCCAGGTCTATAGGGTGAAGCTCAAGACCGGAGAGATAGTTGCTGTGAAGAAGCTGTGGGAAGGACGAGTAGGAAAACTGAATACAGATTCTGTTTTCAAATCGGAGATTGAGACACTCGGCCGAATTCGGCATGTTAATATAGTAAAATTACTATATAGTTGCAGTGCTGACGATTTCCAGATTCTAGTGTATGAGTATTTGGAGAACGGCAGCTTGAGTGACGTTTTGCACGGTGAGAAATGCAGGGAGTTGATGGATTGGTCCAGGCGGTTCAACATAGCAGTAGGTGCTGCTCAGGGACTGGCTTATTTACATGACGACTGTGTGCCGCCTATAGTTCACAGGGACGTCAAGAGTAGTAACATATTGCTGGATCATGATTTCAAAGCTCGCGTTGCGGACTTTGGGTTGGCTAAGATCTTGCGGTCAAAGGCAAACAAAGATGGTGGTGTGACTACATCCAGAGTGGCTGGTTCCTATGGTTACATTGCTCCAGAATATGCTTACACACTTAAAGTGACTGAGAAAAGCGATGTGTATAGCTATGGTGTGGTGCTGATGGAATTGATCACAGGCAAGAGGCCAAATGACCCATCCTTTGGTGAGAACAAGGATATAGTGAAGTGGCTCACCGAGACGGCTTTGTCAACTAATTCTCCAAGAGGGAGTGGCAATAAAGAATGTCGCCGCGGTTACCTGGTCCAGATCGTTGACCCTAGATTGAATCCCTCCACGTGTGATTATGAAGAGATTGAGAAGGTTTTGAATGTGGCTCTGCTTTGCACCTCAACGTTCCCCATTAGTAGACCCTCAATGAGAAGGGTGGTCGACTTGCTCAAGGAATATAAGACTCGTCCCAAGCCATGA 2967 0.4564 MELLVVSRLSFLLVVLFSSLLCLCHFSWQASLVGDSEILLRVKTTQIVDENGSLKNWDRGLHSCNWTGITCDDLNRYIVAIDISSTGIYGGFPFGFCRIRTLRRLSVAQNYLGGVVSPQSLLLCSHLLVLNLSDNLFVGELPEFLSEFSELIRLDFSRNNFTGDIPASFGRLPRLRVLSLSSNLLNGTVPPFLGNLSELTRLELAYNPFRPGPLPSQLGNLSNLEVMFLAGSNVEGSIPDSIGKLVSLKNLDLSQNFLSGKIPDSISGLTSAEQIVLFQNQLSGEIPRGFGNLTSLISLDLSQNNLSGKLPDSLSALHLHFLSLNDNFLEGEIPVNVAKNPNLLTLKLFNNSFTGKLPEDLGRNSDLQELDVSTNDFVGELPKYLCERNKLRRLVTFRNRFSESLPEQYGDCHSLDYVRIQHNQLSGEVPPQFWKLPGLEFLQMNNNLFEGSVSISGAQRLSVLRVSDNRFSGHFSAEICELHDINEIDVGRNRFTGDVPSCVTGLNKLQKLSVQENMFTGPIPRNVNSWTDLTLLNLSYNQFSGTIPPELGNLPDLISLDLAMNFLTGGIPPELAKLKLSQFNVSGNKLSGNVPSGFNNEFYLPGLVGNPNLCSEVTKFLHPCSKSRHLSSIAIIVLSTFVVLLLGFLLLFLKRKKSLFSTGKSKRSFKTTTFHMVGFKEEDVVPLLTSENLIGTGSSGQVYRVKLKTGEIVAVKKLWEGRVGKLNTDSVFKSEIETLGRIRHVNIVKLLYSCSADDFQILVYEYLENGSLSDVLHGEKCRELMDWSRRFNIAVGAAQGLAYLHDDCVPPIVHRDVKSSNILLDHDFKARVADFGLAKILRSKANKDGGVTTSRVAGSYGYIAPEYAYTLKVTEKSDVYSYGVVLMELITGKRPNDPSFGENKDIVKWLTETALSTNSPRGSGNKECRRGYLVQIVDPRLNPSTCDYEEIEKVLNVALLCTSTFPISRPSMRRVVDLLKEYKTRPKP 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0366 988 SMART serkin_6 688 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0366 988 Gene3D Transferase(Phosphotransferase) domain 1 767 987 - -
Prci5g0366 988 FunFam Leucine-rich repeat receptor-like protein kinase TDR 314 626 - -
Prci5g0366 988 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Prci5g0366 988 Pfam Protein kinase domain 690 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0366 988 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 147 213 - -
Prci5g0366 988 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 767 987 - -
Prci5g0366 988 SUPERFAMILY L domain-like 37 315 - -
Prci5g0366 988 ProSiteProfiles Protein kinase domain profile. 688 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0366 988 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 241 981 - -
Prci5g0366 988 Gene3D Ribonuclease Inhibitor 315 627 IPR032675 -
Prci5g0366 988 Gene3D Phosphorylase Kinase; domain 1 666 766 - -
Prci5g0366 988 ProSitePatterns Protein kinases ATP-binding region signature. 694 725 IPR017441 GO:0005524
Prci5g0366 988 SUPERFAMILY RNI-like 229 578 - -
Prci5g0366 988 SMART LRR_typ_2 245 269 IPR003591 -
Prci5g0366 988 SMART LRR_typ_2 172 196 IPR003591 -
Prci5g0366 988 SMART LRR_typ_2 530 554 IPR003591 -
Prci5g0366 988 SMART LRR_typ_2 293 317 IPR003591 -
Prci5g0366 988 Pfam Leucine rich repeat 151 208 IPR001611 GO:0005515
Prci5g0366 988 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Prci5g0366 988 FunFam Leucine-rich receptor-like protein kinase family protein 214 312 - -
Prci5g0366 988 Gene3D Ribonuclease Inhibitor 34 314 IPR032675 -
Prci5g0366 988 SUPERFAMILY Protein kinase-like (PK-like) 688 979 IPR011009 -
Prci5g0366 988 Pfam Leucine Rich Repeat 295 317 IPR001611 GO:0005515
Prci5g0366 988 Pfam Leucine Rich Repeat 247 269 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0366 Prci-Chr5 4892944 4896846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0366 29 984 Receptor kinase-like Gene Family AT5G65710 55.339 0.0 1010
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci5g0366 Pkinase 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0366 - - gmx:100813889 1253.81