Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0355 ATGGGTCTTCCCGCTGATGATTCTACTTCCTCAGACCTCGAGCTTGTTCTAGGGCTTGGTTTGAGTGTTGCTGCTCCTAAGAAATCTTCCTCTAATTTCCCTGTTGCCGCTGCTATCTCTGAGCCGTCTTTGACGCTGGCCCTCTCGAGCGATACTTTTGTCATGCCTAAGAAGATTGATGTGAAAATCAAAGCTTGTGAAGAAACTCCTCTCGATCACTTGTCTCGGCAGACTTCTTCGCCTCACAGTGCTGTTTCGTCCTTCTCTGGTGGGAGAGTCAAGAGGGAGAGGGATCTCAGCTGCGAGGACGCTGAGGCTGAGAGGCTTTCTTCCAGAGTCAGCGACGAAGATGAAGACGGCACTAATGCCAGGAAGAAGCTCAGGCTCACCAAAGAACAATCTGCTCTCCTCGAGGAAAGCTTCAAGCAGCACAGCACCCTCAACCCTAAGCAAAAGCAAGCCTTGGCCAGGCAGTTAAATCTACGGCCTCGCCAGGTTGAAGTGTGGTTCCAGAATCGAAGAGCCAGAACAAAGCTGAAGCAAACGGAGGTGGACTGCGAGTTTTTGAAGAAATGTTGCGAGACGCTGACGGATGAGAACAGGAGGCTCCAGAAGGAGCTGCAAGAGCTGAAGGCACTGAAGATATCTCAGCCACTGTACGTGCCGATGCCGGCTGCGACGCTCACCATGTGCCCGTCTTGCGAGAGGCTGGGCGGCGTCGGGGACGGTGGCTCCAATAAGACCCCATTCTCCATCACTCCCAAGGCGCCTCCTCACCTGTACAACCCCTTCACCAATCCTTCAGCAGCATGTTGA 816 0.5331 MGLPADDSTSSDLELVLGLGLSVAAPKKSSSNFPVAAAISEPSLTLALSSDTFVMPKKIDVKIKACEETPLDHLSRQTSSPHSAVSSFSGGRVKRERDLSCEDAEAERLSSRVSDEDEDGTNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELKALKISQPLYVPMPAATLTMCPSCERLGGVGDGGSNKTPFSITPKAPPHLYNPFTNPSAAC 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0355 271 Coils Coil 186 216 - -
Prci5g0355 271 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 17 247 - -
Prci5g0355 271 FunFam Homeobox-leucine zipper protein 18 109 185 - -
Prci5g0355 271 ProSiteProfiles 'Homeobox' domain profile. 120 180 IPR001356 GO:0003677
Prci5g0355 271 MobiDBLite consensus disorder prediction 72 87 - -
Prci5g0355 271 SMART halz 180 223 IPR003106 GO:0006355|GO:0043565
Prci5g0355 271 ProSitePatterns 'Homeobox' domain signature. 155 178 IPR017970 GO:0000981|GO:0006355
Prci5g0355 271 Gene3D - 128 178 - -
Prci5g0355 271 Pfam Homeobox associated leucine zipper 180 213 IPR003106 GO:0006355|GO:0043565
Prci5g0355 271 CDD homeodomain 124 181 IPR001356 GO:0003677
Prci5g0355 271 SMART HOX_1 122 184 IPR001356 GO:0003677
Prci5g0355 271 MobiDBLite consensus disorder prediction 96 127 - -
Prci5g0355 271 Pfam Homeodomain 124 178 IPR001356 GO:0003677
Prci5g0355 271 SUPERFAMILY Homeodomain-like 114 181 IPR009057 -
Prci5g0355 271 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0355 Prci-Chr5 4793668 4795190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0355 1 271 Homeobox Transcription Factor Family AT4G37790 62.585 5.49e-98 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci5g0355 Homeodomain 1.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0355 K09338 - gmx:100795135 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0638 10 4234341 4235994 Prci5g0355 5 4793668 4795190 CCT