Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0341 ATGGTTTCCACTCTTCCAGCTTCTGATCCTTTCCTCAATAACCCCTTCTGGGCCTTGGAAGGCTCTTTTCCTGCTCCCTGGGAGGACCTGGGCTCCGTCCCCGGGTTGTGCCCGGACATCCTAATAACCTCCCCCGTCAAGCCTGCCGGAAAGTTCCAGCCCCATGCGCTCTCCGACGACGAGAAACGGGTGGTGCCTTCCATTCTGGAAGAGCGCAAAAGGCGGAGAATGATATCGAACCGAGAGTCGGCGAGGCGGTCGCGCATGCGTAAACAGAAGCATCTGGAGAACTTAAGGTTGCAGGTGAACAGGTTCAGAATCCAGAACCGGGAACTCAACAGCAGGTTGCAGTTTCTTCTGCATCACTATAACCGAGTGAGCACGGAAAACGAGTGGCTCCGGTCCGAGCAAACCCGGCTCAGACAAAAACTCCACAGCATAACTCAAATTTTGGCTCTCCAGCCCTTCGCTTCGTCTGCATGGCCATGCAATAGTACGACTATTTTCACGACAGAATAA 519 0.5395 MVSTLPASDPFLNNPFWALEGSFPAPWEDLGSVPGLCPDILITSPVKPAGKFQPHALSDDEKRVVPSILEERKRRRMISNRESARRSRMRKQKHLENLRLQVNRFRIQNRELNSRLQFLLHHYNRVSTENEWLRSEQTRLRQKLHSITQILALQPFASSAWPCNSTTIFTTE 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0341 172 SMART brlzneu 68 132 IPR004827 GO:0003700|GO:0006355
Prci5g0341 172 Coils Coil 95 115 - -
Prci5g0341 172 FunFam BZIP transcription factor 70 121 - -
Prci5g0341 172 Gene3D - 70 124 - -
Prci5g0341 172 PANTHER BZIP TRANSCRIPTION FACTOR 44 54 154 - -
Prci5g0341 172 Pfam bZIP transcription factor 72 126 IPR004827 GO:0003700|GO:0006355
Prci5g0341 172 CDD bZIP_plant_GBF1 73 124 IPR045314 GO:0003700|GO:0006355
Prci5g0341 172 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 75 90 IPR004827 GO:0003700|GO:0006355
Prci5g0341 172 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 70 133 IPR004827 GO:0003700|GO:0006355
Prci5g0341 172 SUPERFAMILY Leucine zipper domain 72 123 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0341 Prci-Chr5 4516967 4517956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0341 61 147 bZIP Transcription Factor Family AT4G37730 52.874 2.19e-23 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci5g0341 bZIP_1 3.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0341 - - qsa:O6P43_024519 167.162