Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0337 ATGGAAACTTCAACTGCAAACTTCTCCTTCTCTGTTTGCTTGTTGCTAATTCTTGGGCTTTCACAGGCTATCGGAAGCTGGAAGAGCTGTCCAGGACCTGAAACAACATGTGGAACCCTGCCTGTTCGGTTTCCTTTCCGAATAAAAGGTCGTCAGCCGGAACAGTGTGGGTATCCGGGGTTTGCTTTGGAATGTTCCTCAACCAATCACTCTGTTCTTGAGCTCCCTGGGCCACTCAAGCTCAATGTAAAAAACATTGATTACAGATCCCAAACCATCGAGTTATATGATCCTTCTGAGTGCCTTTTCAGGCATGTTCGTAACCTTACTCTACTTTCTTCCCCTTTCCATTTCACAACCCACTATCTTTATAATTACACCTTTTTCAACTGCTCAATACCAAAAGATGGACAACTAATTTCAATGTGCCTGAGCAGCTCAACCTATCAAGTATATGCCGTTGATTCTGATGACGAGATTGCAGACCTCCCCTTGTTATTTTGCAGGAAAACATTCAACATTTCAAGCATCCCATATGATATTTTTCATAATGATGCCACTCTTAATTTGATGTGGTCTCATCCAAAGTGTAGCCATTGCGAGTCAAAAGGAACCAGATATCGATGTGGATTTAAGAACATGAATACCAGTTATGAGACTGCATGTTTCGAGGTTCGTCACACAGGTCAATCAAACAAATTTGTAATTACAGGATCAGTCTTGGGCTTACTTCTTTTAGTGGTAGCTTTGTTTGCAATTGATTACATTTACAACTCTTACAAATCACAGAAAGAAAGCCAAGCAATAATTGAAAAGTTTTTGAAAGATTACACAGCTCTCAATCCCACTAGATATTCTTATGCTGAAATTAAGAGGATTACCAATCAATTTGAAGACAAGTTGGGGGAAGGATCTTTTGGTACTGTGTTCAAAGGAAACATTTCATCCCAATTCGAAGTTGCAGTAAAAATCCTTGCTAATTCTGAAGGAAATGGTGAAGAGTTCATAACTGAAGTCGGAACAATGGGCAAAGTCCATCATGTTAACATTATTCGCTTAGTAGGCTTCTGTGCAGATGGCTTTAGAAGAGCACTTGTTTACGAATACCTACCGAAGGGTTCATTACAAAATTTCATAAATTCACCTGACAATAGCCAAAACTTCCTTGGTTGGAAAAGGCTACAAGAAATTGTTTTAGGTATAGCCAAAGGCATTGAGTATCTTCATCAAGGGTGCGAGCAACGCATACTTCATTTTGATATCAAACCTCACAATGTCTTAATTGACAATGACTTCACTCCAAAAATATGTGACTTTGGGTTGGCCAAATTGTGCTCCAAGGATCAAAGCATAGTGTCAATGACTAATGCTAGAGGAACTTTGGGTTACATTGCGCCAGAAGTCTTTTCTCGAAATTTTGGAAATGTGTCTCACAAAGCAGATGTCTATAGTTTTGGAATGTTGCTCCTTGAAGTAATAGGAGGGAGAAGGATTACTCGTGATACAAAAGAAAACGCTACCCAAATTTACTATCCGGAATGGATCTATAATATTTTAGAAGAAAGGGAAGATATGAGAATTCATATTGAGGAAGAAGGGGATGCTAAAATTGCAAAAAAATTGGGAATAGTGGGATTGTGGTGCATCCAGTGGCATGCTATGGATCGACCATCAATGCAAGTAGTGGTTCAAATGTTAGAAGGACAAGGAGATAAACTACCAGTACCTCCAAATCCTTTTGATTCTGAAGGTACTTCAATAAGGAAAAGAGCTAGTGTGCCTACAAGAAGTCTGATGCAAGGTTTAGAAATAATTCAAGAAGTAGAGTGA 1830 0.3913 METSTANFSFSVCLLLILGLSQAIGSWKSCPGPETTCGTLPVRFPFRIKGRQPEQCGYPGFALECSSTNHSVLELPGPLKLNVKNIDYRSQTIELYDPSECLFRHVRNLTLLSSPFHFTTHYLYNYTFFNCSIPKDGQLISMCLSSSTYQVYAVDSDDEIADLPLLFCRKTFNISSIPYDIFHNDATLNLMWSHPKCSHCESKGTRYRCGFKNMNTSYETACFEVRHTGQSNKFVITGSVLGLLLLVVALFAIDYIYNSYKSQKESQAIIEKFLKDYTALNPTRYSYAEIKRITNQFEDKLGEGSFGTVFKGNISSQFEVAVKILANSEGNGEEFITEVGTMGKVHHVNIIRLVGFCADGFRRALVYEYLPKGSLQNFINSPDNSQNFLGWKRLQEIVLGIAKGIEYLHQGCEQRILHFDIKPHNVLIDNDFTPKICDFGLAKLCSKDQSIVSMTNARGTLGYIAPEVFSRNFGNVSHKADVYSFGMLLLEVIGGRRITRDTKENATQIYYPEWIYNILEEREDMRIHIEEEGDAKIAKKLGIVGLWCIQWHAMDRPSMQVVVQMLEGQGDKLPVPPNPFDSEGTSIRKRASVPTRSLMQGLEIIQEVE 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0337 609 Pfam Protein kinase domain 298 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0337 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Prci5g0337 609 Gene3D Phosphorylase Kinase; domain 1 270 369 - -
Prci5g0337 609 Gene3D Transferase(Phosphotransferase) domain 1 370 573 - -
Prci5g0337 609 PANTHER RUST RESISTANCE KINASE LR10-RELATED 267 585 IPR045874 GO:0004672
Prci5g0337 609 ProSiteProfiles Protein kinase domain profile. 295 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0337 609 FunFam PR5-like receptor kinase 370 577 - -
Prci5g0337 609 FunFam serine/threonine-protein kinase PBS1-like 261 369 - -
Prci5g0337 609 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Prci5g0337 609 SMART serkin_6 295 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0337 609 SUPERFAMILY Protein kinase-like (PK-like) 278 568 IPR011009 -
Prci5g0337 609 Pfam Wall-associated receptor kinase galacturonan-binding 32 97 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0337 Prci-Chr5 4471820 4474071 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0337 239 579 Receptor kinase-like Gene Family AT1G66910 46.974 5.61e-106 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci5g0337 Pkinase 3.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0337 - - aprc:113873873 709.138