Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0336 ATGGAAACTTCAACTGCAAACTTCTCCTTCTCTGTTTGCTTGTTGCTAATTCTTGGGCTTTCACAGGCTATCGGAAGCTGGAAGAGCTGTCCAGGACCTGAAACAACATGTGGAACCCTGCCTGTTCGGTTTCCTTTCCGAATAAAAGGTCGTCAGCCGGAACAGTGTGGGTATCCGGGGTTTGCTTTGGAATGTTCCTCAACCAATCACTCTGTTCTTGAGCTCCCTGGGCCACTCAAGCTCAATGTAAAAAACATTGATTACAGATCCCAAACCATCGAGTTATATGATCCTTCTGAGTGCCTTTTCAGGAAAACATTCAACATTTCAAGCATCCCATATGATATTTTTCATAATGATGCCACTCTTAATTTGATGTGGTCTCATCCAAAGTGTAGCCATTGCGAGTCAAAAGGAACCAGATATCGATGTGGATTTAAGAACATGAATACCAGTTATGAGACTGCATGTTTCGAGGTTCGTCACACAGGTCAATCAAACAAATTTGTAATTACAGGATCAGTCTTGGGCTTACTTCTTTTAGTGGTAGCTTTGTTTGCAATTGATTACATTTACAACTCTTACAAATCACAGAAAGAAAGCCAAGCAATAATTGAAAAGTTTTTGAAAGATTACACAGCTCTCAATCCCACTAGATATTCTTATGCTGAAATTAAGAGGATTACCAATCAATTTGAAGACAAGTTGGGGGAAGGATCTTTTGGTACTGTGTTCAAAGGAAACATTTCATCCCAATTCGAAGTTGCAGTAAAAATCCTTGCTAATTCTGAAGGAAATGGTGAAGAGTTCATAACTGAAGTCGGAACAATGGGCAAAGTCCATCATGTTAACATTATTCGCTTAGTAGGCTTCTGTGCAGATGGCTTTAGAAGAGCACTTGTTTACGAATACCTACCGAAGGGTTCATTACAAAATTTCATAAATTCACCTGACAATAGCCAAAACTTCCTTGGTTGGAAAAGGCTACAAGAAATTGTTTTAGGTATAGCCAAAGGCATTGAGTATCTTCATCAAGGGTGCGAGCAACGCATACTTCATTTTGATATCAAACCTCACAATGTCTTAATTGACAATGACTTCACTCCAAAAATATGTGACTTTGGGTTGGCCAAATTGTGCTCCAAGGATCAAAGCATAGTGTCAATGACTAATGCTAGAGGAACTTTGGGTTACATTGCGCCAGAAGTCTTTTCTCGAAATTTTGGAAATGTGTCTCACAAAGCAGATGTCTATAGTTTTGGAATGTTGCTCCTTGAAGTAATAGGAGGGAGAAGGATTACTCGTGATACAAAAGAAAACGCTACCCAAATTTACTATCCGGAATGGATCTATAATATTTTAGAAGAAAGGGAAGATATGAGAATTCATATTGAGGAAGAAGGGGATGCTAAAATTGCAAAAAAATTGGGAATAGTGGGATTGTGGTGCATCCAGTGGCATGCTATGGATCGACCATCAATGCAAGTAGTGGTTCAAATGTTAGAAGGACAAGGAGATAAACTACCAGTACCTCCAAATCCTTTTGATTCTGAAGGTACTTCAATAAGGAAAAGAGCTAGTGTGCCTACAAGAAGTCTGATGCAAGGTTTAGAAATAATTCAAGAAGTAGAGTGA 1635 0.3902 METSTANFSFSVCLLLILGLSQAIGSWKSCPGPETTCGTLPVRFPFRIKGRQPEQCGYPGFALECSSTNHSVLELPGPLKLNVKNIDYRSQTIELYDPSECLFRKTFNISSIPYDIFHNDATLNLMWSHPKCSHCESKGTRYRCGFKNMNTSYETACFEVRHTGQSNKFVITGSVLGLLLLVVALFAIDYIYNSYKSQKESQAIIEKFLKDYTALNPTRYSYAEIKRITNQFEDKLGEGSFGTVFKGNISSQFEVAVKILANSEGNGEEFITEVGTMGKVHHVNIIRLVGFCADGFRRALVYEYLPKGSLQNFINSPDNSQNFLGWKRLQEIVLGIAKGIEYLHQGCEQRILHFDIKPHNVLIDNDFTPKICDFGLAKLCSKDQSIVSMTNARGTLGYIAPEVFSRNFGNVSHKADVYSFGMLLLEVIGGRRITRDTKENATQIYYPEWIYNILEEREDMRIHIEEEGDAKIAKKLGIVGLWCIQWHAMDRPSMQVVVQMLEGQGDKLPVPPNPFDSEGTSIRKRASVPTRSLMQGLEIIQEVE 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0336 544 Pfam Wall-associated receptor kinase galacturonan-binding 32 97 IPR025287 GO:0030247
Prci5g0336 544 Gene3D Phosphorylase Kinase; domain 1 204 304 - -
Prci5g0336 544 Gene3D Transferase(Phosphotransferase) domain 1 305 508 - -
Prci5g0336 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672|GO:0006468
Prci5g0336 544 ProSitePatterns Protein kinases ATP-binding region signature. 236 258 IPR017441 GO:0005524
Prci5g0336 544 SMART serkin_6 230 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0336 544 SUPERFAMILY Protein kinase-like (PK-like) 212 503 IPR011009 -
Prci5g0336 544 PANTHER RUST RESISTANCE KINASE LR10-RELATED 202 520 IPR045874 GO:0004672
Prci5g0336 544 FunFam PR5-like receptor kinase 305 512 - -
Prci5g0336 544 FunFam serine/threonine-protein kinase PBS1-like 196 304 - -
Prci5g0336 544 ProSiteProfiles Protein kinase domain profile. 230 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0336 544 Pfam Protein kinase domain 233 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0336 Prci-Chr5 4471820 4474071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0336 174 514 Receptor kinase-like Gene Family AT1G66910 46.974 1.31e-106 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci5g0336 Pkinase 3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0336 - - aprc:113873873 597.43