Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0335 ATGATAAGAAACATGTGTTTCTCATCAGCACACTTACTGGTGGCGCTGCTTCTGATGGTGGCGTTCTACAAAACTTGCAAGGCGTCAGATGGATACAAGAATTGTTCTGGGTTATGCGGACATCACACCGTGAGCAGCCCTTTCCGTCTGAGAGACTTTGCAGAGCAGTGTGGTGATCATAGGTATGAGCTATCTTGTGAGCACAACCAATTGGTACTGTACTGGCAATCTGGTAGATACAGTGTTGTGTCCATTGATTATGAGAATCTCACGATCCGAGTGAAGGATGCTAATGTTGTGGAGTTGAATTACTCTTCCCTTCCTGGGTATTCTTTAACAGACTACAACTTTAGCTATTGGGATCCATATAACCCCACCGTTCTAACACGCTCTGAAGATGCATCTTGGGATTATAATCGATTGACAAAGATCATGATATACGTGCGGTGTAAAAACCCTGTGGATTCCTCAGTGTTTGCAGACACAGCTCCCTGCTTCAAAAATTCCAGCAGGTCAGTAGCTGCTGCGTCGTCGTATGTGTATGCGAGCGTAATTGGCAGAGAAACTGCAGGGGAATGGGGGTTAGGGGACGATTGTGGTATAGAGCTAATGTACATGACATCGTGGCCTGACCGGAAGAACCAGTCCTGGTCCTGCGAAGTCATCCACAATATGCTTGTTTACGGCTTTGAGCTTTCTTGGCTGAACAGTGACTGCCTCAAATTTGGAGTTTATGCATATCTCGATGAAAGCAAGCAACGCCATTGCGCTGACCCAAACGCCTGCACTATGTTAGCTCTTTATACTGGAGTTAAACTTGTTCTGGGGTCTCCATTTGTCATCGCCCTTTTGATCTATAAATGGCGAAGAAAACATTTATCAATGTATGACAATATTGAAGATTTTTTGAAAAGCGACAACAACATCATGCCTATAAGGTACTCCTACAATGATATCAAGAAGATGACCAAAGGGTTTAAAATAAAACTTGGGAAAGGAGGCTTTGGCTCAGTGTTCAGGGGAACACTTCGAAGTGGTCGTGATGTAGCTGTCAAGATGTTGGATAAAGCCGAAGCCCATGGTCAGGAATTCATCAATGAAGTTGCTACACTTGGCAGAATCCACCATGTTAATGTGGTGCAACTCGTTGGTTATTGTGTGGAGGGATCAAAACGTGCTCTTATATATGAGTTCATGCAAAATGGATCTCTTGAAAAATACATTTTCTCTAAACTTGATGAGAATGATCAATCCTTGAATGTTCATCAATTGTATGCCATTTCTCTAGGAGTAGCTCGTGGTATTGAATATCTTCACAAAGGATGTGTTATGCAAATCCTGCATTTTGATATAAAGCCACACAACATTCTTCTTGATGATAACTTCATCCCAAAGGTTTCTGATTTTGGACTTGCTAAGCTCTATCCTACAAATAATAGCATTGTGTCTCTTACAGCAGCAAGGGGAACTATAGGATACATGGCTCCTGAGCTTTTCTACAGAAATGTTGGTGGGGTCTCTTATAAAGCTGATATCTATAGTTTTGGGATGCTATTAATGGAGATGGCTGGTAGAAGAAAAAATTTAAATGTTTTAGTTGAGCATTCAAGTCAGTTTTACTTTCCCTTTTGGGTTTATGATCAATTAAATGAAGGAAATGAAATTAGCATAGCAGATGCAACAGCGGAAGAAATGAAATTGGCAAGGAAAATGTTGATTGTGGGGTTGTGGTGCATTCAAACAAAGCCCAACGATCGTCCTTCAATGAAAAAAGTTGTAGAGATGCTTGAGGGAGATGAGCAAGACTTAGAATTGCCTCAAAAGCCTTATCTGTATCCAAATGACTTACCAGCAAATGATAATATTGATCATTCAACTTCAACATGGCCATCCAAGTCAAGCGATCGCCCTTCAATGAACAAAGTTGTGGAAATGCTTGAAGGAGAAGAGCAAGAGTTAGAATTGCCTCAATATTCTCAAGATTTACAGACAATTGATGCTAGTGATAACAAATGTTCAGCGTCTCCTTCCTCTAATCCATCAGTGAGTAAGTCAAAAGAAACAACCTCATTTTTAACTAAAGAAGATGAGAGATCAATATAG 2103 0.4085 MIRNMCFSSAHLLVALLLMVAFYKTCKASDGYKNCSGLCGHHTVSSPFRLRDFAEQCGDHRYELSCEHNQLVLYWQSGRYSVVSIDYENLTIRVKDANVVELNYSSLPGYSLTDYNFSYWDPYNPTVLTRSEDASWDYNRLTKIMIYVRCKNPVDSSVFADTAPCFKNSSRSVAAASSYVYASVIGRETAGEWGLGDDCGIELMYMTSWPDRKNQSWSCEVIHNMLVYGFELSWLNSDCLKFGVYAYLDESKQRHCADPNACTMLALYTGVKLVLGSPFVIALLIYKWRRKHLSMYDNIEDFLKSDNNIMPIRYSYNDIKKMTKGFKIKLGKGGFGSVFRGTLRSGRDVAVKMLDKAEAHGQEFINEVATLGRIHHVNVVQLVGYCVEGSKRALIYEFMQNGSLEKYIFSKLDENDQSLNVHQLYAISLGVARGIEYLHKGCVMQILHFDIKPHNILLDDNFIPKVSDFGLAKLYPTNNSIVSLTAARGTIGYMAPELFYRNVGGVSYKADIYSFGMLLMEMAGRRKNLNVLVEHSSQFYFPFWVYDQLNEGNEISIADATAEEMKLARKMLIVGLWCIQTKPNDRPSMKKVVEMLEGDEQDLELPQKPYLYPNDLPANDNIDHSTSTWPSKSSDRPSMNKVVEMLEGEEQELELPQYSQDLQTIDASDNKCSASPSSNPSVSKSKETTSFLTKEDERSI 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0335 700 SMART serkin_6 324 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0335 700 MobiDBLite consensus disorder prediction 619 638 - -
Prci5g0335 700 FunFam serine/threonine-protein kinase PBS1-like 295 398 - -
Prci5g0335 700 SUPERFAMILY Protein kinase-like (PK-like) 306 598 IPR011009 -
Prci5g0335 700 PANTHER RUST RESISTANCE KINASE LR10-RELATED 296 616 IPR045874 GO:0004672
Prci5g0335 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Prci5g0335 700 Gene3D Phosphorylase Kinase; domain 1 290 398 - -
Prci5g0335 700 ProSiteProfiles Protein kinase domain profile. 324 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0335 700 Pfam Protein tyrosine and serine/threonine kinase 328 596 IPR001245 GO:0004672|GO:0006468
Prci5g0335 700 FunFam PR5-like receptor kinase 399 607 - -
Prci5g0335 700 Pfam Wall-associated receptor kinase galacturonan-binding 35 96 IPR025287 GO:0030247
Prci5g0335 700 MobiDBLite consensus disorder prediction 656 688 - -
Prci5g0335 700 MobiDBLite consensus disorder prediction 607 700 - -
Prci5g0335 700 Gene3D Transferase(Phosphotransferase) domain 1 399 607 - -
Prci5g0335 700 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0335 Prci-Chr5 4442023 4446398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0335 1 617 Receptor kinase-like Gene Family AT5G38260 36.391 1.99e-107 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci5g0335 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0335 - - pcin:129310315 1368.21