Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0334 ATGATAAGAAACATGTGTTTCTCATCAGCACACTTACTGGTGGCGCTGCTTCTGATGGTGGCGTTCTACAAAACTTGCAAGGCGTCAGATGGATACAAGAATTGTTCTGGGTTATGCGGACATCACACCGTGAGCAGCCCTTTCCGTCTGAGAGACTTTGCAGAGCAGTGTGGTGATCATAGGTATGAGCTATCTTGTGAGCACAACCAATTGGTACTGTACTGGCAATCTGGTAGATACAGTGTTGTGTCCATTGATTATGAGAATCTCACGATCCGAGTGAAGGATGCTAATGTTGTGGAGTTGAATTACTCTTCCCTTCCTGGGTATTCTTTAACAGACTACAACTTTAGCTATTGGGATCCATATAACCCCACCGTTCTAACACGCTCTGAAGATGCATCTTGGGATTATAATCGATTGACAAAGATCATGATATACGTGCGGTGTAAAAACCCTGTGGATTCCTCAGTGTTTGCAGACACAGCTCCCTGCTTCAAAAATTCCAGCAGGTCAGTAGCTGCTGCGTCGTCGTATGTGTATGCGAGCGTAATTGGCAGAGAAACTGCAGGGGAATGGGGGTTAGGGGACGATTGTGGTATAGAGCTAATGTACATGACATCGTGGCCTGACCGGAAGAACCAGTCCTGGTCCTGCGAAGTCATCCACAATATGCTTGTTTACGGCTTTGAGCTTTCTTGGCTGAACAGTGACTGCCTCAAATTTGGAGTTTATGCATATCTCGATGAAAGCAAGCAACGCCATTGCGCTGACCCAATTAAATCAGGTCCAGGCGGCATCACTTTTGTAGAAATCTTTTGGTATACCGTGGACGCCTGCACTATGTTAGCTCTTTATACTGGAGTTAAACTTGTTCTGGGGTCTCCATTTGTCATCGCCCTTTTGATCTATAAATGGCGAAGAAAACATTTATCAATGTATGACAATATTGAAGATTTTTTGAAAAGCGACAACAACATCATGCCTATAAGGTACTCCTACAATGATATCAAGAAGATGACCAAAGGGTTTAAAATAAAACTTGGGAAAGGAGGCTTTGGCTCAGTGTTCAGGGGAACACTTCGAAGTGGTCGTGATGTAGCTGTCAAGATGTTGGATAAAGCCGAAGCCCATGGTCAGGAATTCATCAATGAAGTTGCTACACTTGGCAGAATCCACCATGTTAATGTGGTGCAACTCGTTGGTTATTGTGTGGAGGGATCAAAACGTGCTCTTATATATGAGTTCATGCAAAATGGATCTCTTGAAAAATACATTTTCTCTAAACTTGATGAGAATGATCAATCCTTGAATGTTCATCAATTGTATGCCATTTCTCTAGGAGTAGCTCGTGGTATTGAATATCTTCACAAAGGATGTGTTATGCAAATCCTGCATTTTGATATAAAGCCACACAACATTCTTCTTGATGATAACTTCATCCCAAAGGTTTCTGATTTTGGACTTGCTAAGCTCTATCCTACAAATAATAGCATTGTGTCTCTTACAGCAGCAAGGGGAACTATAGGATACATGGCTCCTGAGCTTTTCTACAGAAATGTTGGTGGGGTCTCTTATAAAGCTGATATCTATAGTTTTGGGATGCTATTAATGGAGATGGCTGGTAGAAGAAAAAATTTAAATGTTTTAGTTGAGCATTCAAGTCAGTTTTACTTTCCCTTTTGGGTTTATGATCAATTAAATGAAGGAAATGAAATTAGCATAGCAGATGCAACAGCGGAAGAAATGAAATTGGCAAGGAAAATGTTGATTGTGGGGTTGTGGTGCATTCAAACAAAGCCCAACGATCGTCCTTCAATGAAAAAAGTTGTAGAGATGCTTGAGGGAGATGAGCAAGACTTAGAATTGCCTCAAAAGCCTTATCTGTATCCAAATGACTTACCAGCAAATGATAATATTGATCATTCAACTTCAACATGGCCATCCAAGTCAAGCGATCGCCCTTCAATGAACAAAGTTGTGGAAATGCTTGAAGGAGAAGAGCAAGAGTTAGAATTGCCTCAATATTCTCAAGATTTACAGACAATTGATGCTAGTGATAACAAATGTTCAGCGTCTCCTTCCTCTAATCCATCAGTGAGTAAGTCAAAAGAAACAACCTCATTTTTAACTAAAGAAGATGAGAGATCAATATAG 2157 0.4089 MIRNMCFSSAHLLVALLLMVAFYKTCKASDGYKNCSGLCGHHTVSSPFRLRDFAEQCGDHRYELSCEHNQLVLYWQSGRYSVVSIDYENLTIRVKDANVVELNYSSLPGYSLTDYNFSYWDPYNPTVLTRSEDASWDYNRLTKIMIYVRCKNPVDSSVFADTAPCFKNSSRSVAAASSYVYASVIGRETAGEWGLGDDCGIELMYMTSWPDRKNQSWSCEVIHNMLVYGFELSWLNSDCLKFGVYAYLDESKQRHCADPIKSGPGGITFVEIFWYTVDACTMLALYTGVKLVLGSPFVIALLIYKWRRKHLSMYDNIEDFLKSDNNIMPIRYSYNDIKKMTKGFKIKLGKGGFGSVFRGTLRSGRDVAVKMLDKAEAHGQEFINEVATLGRIHHVNVVQLVGYCVEGSKRALIYEFMQNGSLEKYIFSKLDENDQSLNVHQLYAISLGVARGIEYLHKGCVMQILHFDIKPHNILLDDNFIPKVSDFGLAKLYPTNNSIVSLTAARGTIGYMAPELFYRNVGGVSYKADIYSFGMLLMEMAGRRKNLNVLVEHSSQFYFPFWVYDQLNEGNEISIADATAEEMKLARKMLIVGLWCIQTKPNDRPSMKKVVEMLEGDEQDLELPQKPYLYPNDLPANDNIDHSTSTWPSKSSDRPSMNKVVEMLEGEEQELELPQYSQDLQTIDASDNKCSASPSSNPSVSKSKETTSFLTKEDERSI 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0334 718 Pfam Protein tyrosine and serine/threonine kinase 346 614 IPR001245 GO:0004672|GO:0006468
Prci5g0334 718 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Prci5g0334 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Prci5g0334 718 MobiDBLite consensus disorder prediction 674 706 - -
Prci5g0334 718 FunFam PR5-like receptor kinase 417 625 - -
Prci5g0334 718 MobiDBLite consensus disorder prediction 625 718 - -
Prci5g0334 718 PANTHER RUST RESISTANCE KINASE LR10-RELATED 314 634 IPR045874 GO:0004672
Prci5g0334 718 SUPERFAMILY Protein kinase-like (PK-like) 324 616 IPR011009 -
Prci5g0334 718 FunFam serine/threonine-protein kinase PBS1-like 313 416 - -
Prci5g0334 718 Gene3D Transferase(Phosphotransferase) domain 1 417 625 - -
Prci5g0334 718 Pfam Wall-associated receptor kinase galacturonan-binding 35 96 IPR025287 GO:0030247
Prci5g0334 718 Gene3D Phosphorylase Kinase; domain 1 308 416 - -
Prci5g0334 718 ProSiteProfiles Protein kinase domain profile. 342 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0334 718 SMART serkin_6 342 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0334 718 MobiDBLite consensus disorder prediction 637 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0334 Prci-Chr5 4442023 4446398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0334 1 635 Receptor kinase-like Gene Family AT5G38260 35.832 9.79e-105 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci5g0334 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0334 - - pcin:129310315 1419.45