Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0333 ATGGAAACTTCAACTGCAAACTCCTTCTTCTCCGTTTGCTTGTTGCTAATTCTTGGGCTCTCAGAGGCTGTCGGAAGCTGGAAGAGCTGTTTAGAACCTGAAACAACATGGGGAACCCTGCCTGTTCGGTTTCCTTTCCGAATAAAAGGACGCCAGCCAGAACAGTGTGGGTATCCTGGGTTTGCTTTGGAATGTTCCTCAACCAATCACTCTGTTCTTGAGCTCCCTGGGCCAATCAAGCTCAATGTAAACAACATTGATTACCTATCCCAAACCATTGAGTTATATGATCCTTCTGGCTGCCTTTTTAGGCATGTTCGTAACCTCACCCAACTTTCTTGCCCATTCCATTTCCGACCCCAGTATCTTTATAACTACGTCTTTTTCAATTGCTCAATACCAAAAGATGGACAACTAATTTCAACGTGCCTGAGAAGCTCAACCTATCAAGTATATGCCATTTATTCTGATGACGAGATTGCAGACCTCCCCTTGTTATTTTGCAGCAAAACATTTAACATTTCAAGCATCCCATATAATATTTTTCACAATGATGCCACTCTTAATTTGATGTGGTCTCATCCAAAGTGTAGCCATTGCGAGTCAAAAGGAACCAGATACCGATGTGGATTTAAGAACATGAATACCAGTTATGATACTGCATGTTTCGAGGTTCGTCACACAGGTCAATCAAACAAATTTGTAATTACAGGATCAGTCTTGGGCTCACTTCTTTTAGTGGTAGCTTTGTTTGCAATTCATTACATTTACAACTCTTACAAATCACAGAAAGAAAGCCAAGCAATAATTGAAAAGTTTTTGAAAGATTACACAGCTCTCAATCCCACTAGATATTCTTATGCTGAAATTAAGAGGATTACCAATCAATTTGAAGACAAGTTGGGGGAAGTATCTTTTGGTACTGTGTTCAAAGGAAACATTTCATCCCAATTCAAAGTTGCAGTAAAAATCCTTGCTAATTCTGAAGGAAACGGTGAAGAGTTCATAACTGGAGTTGGAACAATGGGCAAAGTCCATCATGTTAACATTATTCGCTTAGTAGGCTTCTGTGCAGATGGCTTTAGAAGAGCACTTGTTTACGAATACCTACCGAAGGGTTCATTACAAAATTTCATAAATTCACCTGACAATAGCCAAAACTTCCTTGGTTGGAAAAGGCTACAAGAAATTGTTTTAGGTATAGCCAAAGGCATTGAGTATCTTCATCAAGGGTGTGAGCAACGCATACTTCATTTTGATATCAAACCTCACAATGTCTTAATTGACAATGACTTCACTCCAAAAATATGTGACTTTGGGTTGGCCAAATTGTGCTCCAAGGATCAAAGCATAGTATCAATGACTAATGCTAGAGGAACTTTGGGTTACATTGCACCAGAAGTCTTTTCTCGAAATTTTGGAAATGTGTCTCACAAAGCAGATGTCTATAGTTTTGGAATGTTGCTCCTTAAAGTAATAGGAGGGAGAAGGATTACTCATGACACAAAAGAAAACGCTACCCAGATTTACTATCCGGAATGGATCTATAATGTTTCAGAAGAAAGGGAGGATATGAGAATTCATATTGAGGAAGAAGGGGATGCTAAAATTGCAAAAAAATTGGGAATAGTGGGACTGTGGTGCATCCAGTGGCATGCTGTGGATCGACCATCAATGCAAGTAGTGGTTCAAATGTTAGAAGGACAAGGAGATAAACTACCAGTACCTCCAAATCCTTTTGATTCTGAAGGTACTTCAATAAGGAAAAGAGCTAGTGTGCCAACAAGAAGCCTGATGCAAGGTTTAGAAATAATTCAAGAAGTAGGGTGA 1830 0.3934 METSTANSFFSVCLLLILGLSEAVGSWKSCLEPETTWGTLPVRFPFRIKGRQPEQCGYPGFALECSSTNHSVLELPGPIKLNVNNIDYLSQTIELYDPSGCLFRHVRNLTQLSCPFHFRPQYLYNYVFFNCSIPKDGQLISTCLRSSTYQVYAIYSDDEIADLPLLFCSKTFNISSIPYNIFHNDATLNLMWSHPKCSHCESKGTRYRCGFKNMNTSYDTACFEVRHTGQSNKFVITGSVLGSLLLVVALFAIHYIYNSYKSQKESQAIIEKFLKDYTALNPTRYSYAEIKRITNQFEDKLGEVSFGTVFKGNISSQFKVAVKILANSEGNGEEFITGVGTMGKVHHVNIIRLVGFCADGFRRALVYEYLPKGSLQNFINSPDNSQNFLGWKRLQEIVLGIAKGIEYLHQGCEQRILHFDIKPHNVLIDNDFTPKICDFGLAKLCSKDQSIVSMTNARGTLGYIAPEVFSRNFGNVSHKADVYSFGMLLLKVIGGRRITHDTKENATQIYYPEWIYNVSEEREDMRIHIEEEGDAKIAKKLGIVGLWCIQWHAVDRPSMQVVVQMLEGQGDKLPVPPNPFDSEGTSIRKRASVPTRSLMQGLEIIQEVG 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0333 609 FunFam serine/threonine-protein kinase PBS1-like 261 369 - -
Prci5g0333 609 Pfam Wall-associated receptor kinase galacturonan-binding 38 97 IPR025287 GO:0030247
Prci5g0333 609 PANTHER RUST RESISTANCE KINASE LR10-RELATED 266 585 IPR045874 GO:0004672
Prci5g0333 609 Gene3D Transferase(Phosphotransferase) domain 1 370 573 - -
Prci5g0333 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Prci5g0333 609 SMART serkin_6 295 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0333 609 SUPERFAMILY Protein kinase-like (PK-like) 277 568 IPR011009 -
Prci5g0333 609 FunFam PR5-like receptor kinase 370 577 - -
Prci5g0333 609 ProSiteProfiles Protein kinase domain profile. 295 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0333 609 Pfam Protein kinase domain 298 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0333 609 Gene3D Phosphorylase Kinase; domain 1 269 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0333 Prci-Chr5 4439367 4441800 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0333 275 579 Receptor kinase-like Gene Family AT1G66910 50.161 8.31e-102 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci5g0333 Pkinase 6.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0333 - - aprc:113873873 703.36