Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0332 ATGGTCCCACACTCATGGAGAGATTTTGGAAGAAAATTATATGACCTACCATACATCGGGCGGGACATCACGCTGCTTGTTATCCCAGTGTATATCGGAATTCCCGCCTGCTTAATTTTAGTTTGTCATTGTGCTTGTAAATGTGTTATCGGCCCTCCATTTATCATTGGCCTGTTGATCTATAAATGGCGACGGAGACATCTATCAAGTTACACCAACATTGAAGATTTCTTGCAAAGCGAGAACACAATCATGCCTTTGAGGTACTCCTATAAAGAAATCAACAAGATAACGAAAGGGTTTAAAATAAAAATTGGGAAAGGAGGCTTTGGCTCCGTGTTCAAAGGACAACTTCGAAGCGGACATGATGTAGCTGTTAAAATGTTGGATAAGGCCAAGGCTGATGGACAAGAATTCATTAGTGAAGTTGCTACACTTGGTAGAATTCATCATGTTAATGTGATGCAGCTCATGGGTTATTGTGTGGAAGGATCAAAACATGCTCTAGTATATGAGTTAATGCAAAATGGGTCTCTTGACAAATACATTTTCTCGAAGGATGATGATAATGAGCAATCATTGAATGTTCATCAATTGTATGCCATTTCTCTAGGAGTAGCACGTGGCATAGAATATCTACATAAAGGATGCAACATGCAAATTTTGCATTTTGATATAAAGCCACACAATATTCTTCTTGATGATCAATTCATCCCAAAAATTTCTGATTTTGGCCTTGCTAGACTCTATCCTGCAAATTATAGTGTTGTGTCTCTTACAGCAGCACAGGGGACTATAGGATACATGGCTCCTGAACTATTCTACAGAAATGTGGGTGGAATCTCTTACAAAGCTGATGTCTATAGTTTTGGGATGCTCTTAATGGAAATTGCTGGTAGGAGGAAGAATTTGAATGTACTGGCTGACCGTTCGAGTCAATTTTACTTTTCCTTTTGGGTATATGATCAGATAAATGAAGGAAATGATGTCAACATAGCAGATGCAACAGAGGAAGAAATGACATTGGCAAGGAAAATGATGATCGTGGGGTTGTGGTGCATTCAAACTAAGCCTGGTGACCGTCCTTCAATGAACAAAGTTGTGGAGATGCTTGAGGGGGATGAGCAAGACTTGGTATTGCCTCAAAAGCCTTATTTCTATCCGCAAGATTTACCAATTGATGATAATAATCGTTCAAGTTCAATGGGCTCATCCTCCAAACCTGAAGAATGTTCTTCAATGGACGAAGTTGTCGAGATGCTAGAGGTAGAAGAAGAAATCTCAGAATTGCCTCAAAGGTCATATCTGCATGCACTAGATTTACCAACAAAATCATTCAGTTTCAACGAGTAA 1353 0.3932 MVPHSWRDFGRKLYDLPYIGRDITLLVIPVYIGIPACLILVCHCACKCVIGPPFIIGLLIYKWRRRHLSSYTNIEDFLQSENTIMPLRYSYKEINKITKGFKIKIGKGGFGSVFKGQLRSGHDVAVKMLDKAKADGQEFISEVATLGRIHHVNVMQLMGYCVEGSKHALVYELMQNGSLDKYIFSKDDDNEQSLNVHQLYAISLGVARGIEYLHKGCNMQILHFDIKPHNILLDDQFIPKISDFGLARLYPANYSVVSLTAAQGTIGYMAPELFYRNVGGISYKADVYSFGMLLMEIAGRRKNLNVLADRSSQFYFSFWVYDQINEGNDVNIADATEEEMTLARKMMIVGLWCIQTKPGDRPSMNKVVEMLEGDEQDLVLPQKPYFYPQDLPIDDNNRSSSMGSSSKPEECSSMDEVVEMLEVEEEISELPQRSYLHALDLPTKSFSFNE 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0332 450 SMART serkin_6 99 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0332 450 MobiDBLite consensus disorder prediction 393 411 - -
Prci5g0332 450 ProSiteProfiles Protein kinase domain profile. 99 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0332 450 SUPERFAMILY Protein kinase-like (PK-like) 78 372 IPR011009 -
Prci5g0332 450 FunFam PR5-like receptor kinase 174 382 - -
Prci5g0332 450 FunFam serine/threonine-protein kinase PBS1-like 69 173 - -
Prci5g0332 450 MobiDBLite consensus disorder prediction 391 416 - -
Prci5g0332 450 Gene3D Phosphorylase Kinase; domain 1 74 173 - -
Prci5g0332 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Prci5g0332 450 Gene3D Transferase(Phosphotransferase) domain 1 174 381 - -
Prci5g0332 450 ProSitePatterns Protein kinases ATP-binding region signature. 105 127 IPR017441 GO:0005524
Prci5g0332 450 PANTHER RUST RESISTANCE KINASE LR10-RELATED 71 395 IPR045874 GO:0004672
Prci5g0332 450 Pfam Protein tyrosine and serine/threonine kinase 103 371 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0332 Prci-Chr5 4401629 4408722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0332 79 412 Receptor kinase-like Gene Family AT1G66910 46.199 1.08e-99 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci5g0332 PK_Tyr_Ser-Thr 5.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0332 - - pcin:129310673 827.78