Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0329 ATGTGTTCCTCACAAGCAAAATTACCAGTGGCTATGATTCTGATAATGTTACTCTGCAGAACTTGCAAGGCATTGGACGGACACCAGAACTGTTCAAGTTTATGCGGAGATCATAACGTGATCAGCCCTTTCCGGTTAAAAGACTCTGCAGAGGAGTGTGGTGACCACAGGTATGAGCTATCATGCGAGCGCAACCAGTTGGTATTGCACTGGCAATCTGGAAGTTACAACGTTGTGTCCATTAATTATGAGAACTACACTATCCGAGTGAGAGACTCTAATATTGTGGAGTTAGATTCATCTTCCTTGCCACGAGATTCTTTAACCGACTACAACTTTAGCAAATGGGATCCATATACCTCCACCATTGATGCGCACGATGAAAATGGAGTTTTGCTATGGTATGGATTGAACAGAGATATGATATACGTAAGGTGTGAACAGTCTGTGGATTCACTTGAGTTTGTAGACACATACCGTTGCTTCAAAAGCTCAAATGGGTCTGTATCTTCTTCTTCATCATCATCATCATCGGATTTGTACGCCTATGTTGGCAGCGGATATGTAGGGGATGTGGGGTTAGAGGATGATTGTCGGATAGAAGCCATGTATATGACGTCTTGGCCTGCTTGGAACAACCAGTCCAGGTCCTGCGCAGACATCAACCATATGCTTGTTTATGGTTTTGAGCTTTCTTGGCTCAACAGTTTCTGCCCGGAGTCTGGAGATGATTATGTGATAATTCTTGGTGGTAGGAAACCTCGTTGTGAAATAGCAAGCAATAACATTTTTAAAAAGATCCTTTGGGTTATCCAAGATGTTGGGGGCTACGTCCACACTATATTAGTTTATCATACTCTTGGTAAAATTGTTTTGGGCACTCCATTTGTGGTTGCTCTTTTGATCTATAAATGGCGGCGGAGACATTTGTCAATGTATCACAACATTGAAGATTTTTTGCAAAGTGACAACAATATTATGCCTATAAGGTACTCCTACAAAGACATCAAAAAGATGACGAAAGGGTTTAAGATAAAACTTGGGAAAGGAGGCTATGGTTCTGTATTTAGAGGACAACTTCGAAGTGGTCGTGATGTAGCTGTCAAGATTTTGGATAAGGCCAAAGCTGATAATCAAGAATTCATCAACGAAGTAGCTACACTTGGTAGAATTCACCATATTAATGTCGTGCAACTCATTGGTTATTGTGTAGAAGGAGCAAAACGTGCTCTTATATATGAGTTCATGCAAAATGGATCTCTTGACAGATACGTTTTCTCTAAACGAGACAATGAGCAATCCTTAGATCTTCATCAGTTGTATGCCATTTCTATTGGAGTAGCTCATGGTATCGAATATCTTCACAAAGGTTGCAACATGCAAATTCTGCATTTTGATATAAAGCCACACAACATCCTTCTTGATGATAACTTCATCCCAAAGGTTTCTGATTTTGGGCTTGCTAAGCTCTATCCTACAAATGATAGCATTGTGCCTCTTACTGCAATAAGAGGTACTATAGGATATATGGCCCCTGAACTCTTCTATAGAAATGTGGGCGGAGTCTCTTACAAAGCCGATGTCTATAGTTTTGGAAAGTTATTAATGGATATTGCTGGCAGAAAGAAAAATTTGAACATGCCAATCGAGCAATCTAGTCAATTTTACTTCCCCTTTTGGGTTTATGATCAATTAAACGAAGGAAATGAAATTCATATAGAAAATGCAACGGAAGAAGAAATGGAATTGGCAAGGAAAATGATGATTGTGGGATTGTGGTGCATCCAGACAAAGCCTAGTGATCGTCCTTCAATGAACAAAGTTGTAGAGATGCTTGAGGGAGAGGAGAATGACTTAGAAATGCCTCAAAAACCTTATCTATATCCACAGGATATATCAACTGTTGATGTTAGTAATCATTCAAGTTCAATAATGTCCTCCTCTGATCTATCACTGGGTAATTGTAAAGAAACAACTTCATTTTCAACTCAAGAAGATGTGAGATCAATATAG 2013 0.3949 MCSSQAKLPVAMILIMLLCRTCKALDGHQNCSSLCGDHNVISPFRLKDSAEECGDHRYELSCERNQLVLHWQSGSYNVVSINYENYTIRVRDSNIVELDSSSLPRDSLTDYNFSKWDPYTSTIDAHDENGVLLWYGLNRDMIYVRCEQSVDSLEFVDTYRCFKSSNGSVSSSSSSSSSDLYAYVGSGYVGDVGLEDDCRIEAMYMTSWPAWNNQSRSCADINHMLVYGFELSWLNSFCPESGDDYVIILGGRKPRCEIASNNIFKKILWVIQDVGGYVHTILVYHTLGKIVLGTPFVVALLIYKWRRRHLSMYHNIEDFLQSDNNIMPIRYSYKDIKKMTKGFKIKLGKGGYGSVFRGQLRSGRDVAVKILDKAKADNQEFINEVATLGRIHHINVVQLIGYCVEGAKRALIYEFMQNGSLDRYVFSKRDNEQSLDLHQLYAISIGVAHGIEYLHKGCNMQILHFDIKPHNILLDDNFIPKVSDFGLAKLYPTNDSIVPLTAIRGTIGYMAPELFYRNVGGVSYKADVYSFGKLLMDIAGRKKNLNMPIEQSSQFYFPFWVYDQLNEGNEIHIENATEEEMELARKMMIVGLWCIQTKPSDRPSMNKVVEMLEGEENDLEMPQKPYLYPQDISTVDVSNHSSSIMSSSDLSLGNCKETTSFSTQEDVRSI 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0329 670 Gene3D Phosphorylase Kinase; domain 1 306 415 - -
Prci5g0329 670 Pfam Wall-associated receptor kinase galacturonan-binding 31 92 IPR025287 GO:0030247
Prci5g0329 670 ProSiteProfiles Protein kinase domain profile. 341 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0329 670 FunFam PR5-like receptor kinase 416 624 - -
Prci5g0329 670 PANTHER RUST RESISTANCE KINASE LR10-RELATED 313 638 IPR045874 GO:0004672
Prci5g0329 670 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Prci5g0329 670 SMART serkin_6 341 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0329 670 MobiDBLite consensus disorder prediction 645 670 - -
Prci5g0329 670 SUPERFAMILY Protein kinase-like (PK-like) 322 614 IPR011009 -
Prci5g0329 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Prci5g0329 670 Pfam Protein tyrosine and serine/threonine kinase 345 612 IPR001245 GO:0004672|GO:0006468
Prci5g0329 670 FunFam serine/threonine-protein kinase PBS1-like 312 415 - -
Prci5g0329 670 Gene3D Transferase(Phosphotransferase) domain 1 416 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0329 Prci-Chr5 4388590 4391932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0329 291 642 Receptor kinase-like Gene Family AT1G66910 47.238 2.53e-104 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci5g0329 PK_Tyr_Ser-Thr 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0329 - - pcin:129310315 885.174