Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0327 ATGGAAATTACAACTATAAACTCCTTCTTCTTTTGCTTGTTGATAATTTCTGGGTTTTCAGAGTCTGTAAGAAGCTGGGATAGCTGTCCAGAACCTGAAACAACATGTGGAAACCTTCGTGTTCGGTTTCCTTTTCGAGTAAAAGGACGCCAACCAGAACAGTGTGGGTATCCTGGGTTTGCTTTACAATGTTCATCTACCACTCATGCTGTTCTTGAGCTTGGGTCTGTGAAGCTCAATGTCAGACACATTGACTACAAATCCCAAACCATTCAGTTGTATGATCCTTCTGGTTGTCTTTCTAGACATGTCCGTAATCTCACTCTGCTTCATTCCCCTTTCCAGTTCATTGACCAGAATCTTAATGACTTCACCATTTTCAATTGCTCATCACCTAGAGATGGAGCAATTATTTCAACGTGCCTGAGCAGCTCTTCCCATCAAGTGTATGCTGTTTTATCATATCGTGAGATTGGGAAGCTTCCCTTGTTATTTTGCAGCAAAGTATTCAACATTTCATCCGTCCCACCTGAGATATTTGATGATGACAACACTCTTCATTTGATGTGGTCTAAACCAATGTGTAAACATTGTGAATCAAATGGAACGACATGTGGATTCAAGAACAGTAATAACAGCTATGATACTGCATGTTTCGGGGATCGTCACAGTGGTTCATCAAACAAATTTGTAATTACAGGATCAATCATGGGCTCACTTCTAGTGGTCAGTACTCTTGTTGCAATTCATTACATCCACAAATCTTGCAAATCACGGAAAGAAAGCCAAGCAATAATTGAGAAGTTTTTGAAAGATTATAGAGCTCTCAAGCCTACAAGATATTCTTATGCTGAAATTAAGAGGATTGCCAATCAATTTGAAGACAAGTTAGGGGAAGGATCTTTTGGTACTGTGTTCAAAGGAAGCATTTCATCTGAGTTCAAAGTTGCGGTGAAGATCCTCACTAATTCTGAAGGAAATGGCGAAGAATTCATCACTGAAGTAGGAACAATGGGAAAAATTCATCATGTCAACATTATTCGTTTAATTGGGTTCTGTGCAGATGGCTTTAGAAGAGCACTGGTTTACGAGTACTTTCCAAATGGTTCATTACAAAATTTCATAACTTCACCCGACAATAGGCAAAACTTTCTTGGTTGGACAAAGCTCCATGAAATTGCTTTAGGCATAGCCAAAGGAATTGAATATCTTCATCAAGGGTGTGAGCAACGCATACTTCATTTTGACATCAAACCTCATAATGTTTTACTGGATGATGACTTCATGCCAAAAATATGTGATTTTGGGCTGGCTAAATTGTGTTCCAAAGACCAAAGTGTAGTGTCAATGACTACTGCCAGAGGAACTTTGGGCTACATCGCTCCAGAAGTCTTCTCTCGAAACTTTGGCAATGTGTCTCACAAAGCAGATGTTTATAGTTTTGGGATGTTACTACTTGAAGTGATTGGAGGGAAAAAGATCACCCATGACACAAAAGAAAATACAAGTCATGTATACTATCCAGAATGGATGCATAACACCTTAGAAGAAAGAGAGGACGTAAGAATTCATATTGAGGAGGAAGAGGATGCTAAAATTGCAAGAAAATTGGGAATAGTGGGCCTTTGGTGCATCCAATGGCATGCTGTGAATCGACCATCAATGCAAGTGGTGGTTCAAATGTTAGAAGGACAAGGAGACAAATTACCAATACCTCCAAATCCTTTTGATTCTGAAGGCCCTTCAACAAGAGAAAGGGCCAATGTACATGCAAGAAATCTAATGCAAGGTTTAGAAATAATTCAGGAAGTAGAGTGA 1818 0.3927 MEITTINSFFFCLLIISGFSESVRSWDSCPEPETTCGNLRVRFPFRVKGRQPEQCGYPGFALQCSSTTHAVLELGSVKLNVRHIDYKSQTIQLYDPSGCLSRHVRNLTLLHSPFQFIDQNLNDFTIFNCSSPRDGAIISTCLSSSSHQVYAVLSYREIGKLPLLFCSKVFNISSVPPEIFDDDNTLHLMWSKPMCKHCESNGTTCGFKNSNNSYDTACFGDRHSGSSNKFVITGSIMGSLLVVSTLVAIHYIHKSCKSRKESQAIIEKFLKDYRALKPTRYSYAEIKRIANQFEDKLGEGSFGTVFKGSISSEFKVAVKILTNSEGNGEEFITEVGTMGKIHHVNIIRLIGFCADGFRRALVYEYFPNGSLQNFITSPDNRQNFLGWTKLHEIALGIAKGIEYLHQGCEQRILHFDIKPHNVLLDDDFMPKICDFGLAKLCSKDQSVVSMTTARGTLGYIAPEVFSRNFGNVSHKADVYSFGMLLLEVIGGKKITHDTKENTSHVYYPEWMHNTLEEREDVRIHIEEEEDAKIARKLGIVGLWCIQWHAVNRPSMQVVVQMLEGQGDKLPIPPNPFDSEGPSTRERANVHARNLMQGLEIIQEVE 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0327 605 ProSiteProfiles Protein kinase domain profile. 291 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0327 605 SMART serkin_6 291 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0327 605 Pfam Wall-associated receptor kinase galacturonan-binding 29 95 IPR025287 GO:0030247
Prci5g0327 605 FunFam serine/threonine-protein kinase PBS1-like 256 365 - -
Prci5g0327 605 Gene3D Transferase(Phosphotransferase) domain 1 366 569 - -
Prci5g0327 605 Gene3D Phosphorylase Kinase; domain 1 241 365 - -
Prci5g0327 605 FunFam PR5-like receptor kinase 366 573 - -
Prci5g0327 605 Pfam Protein kinase domain 294 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0327 605 SUPERFAMILY Protein kinase-like (PK-like) 274 564 IPR011009 -
Prci5g0327 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Prci5g0327 605 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Prci5g0327 605 PANTHER RUST RESISTANCE KINASE LR10-RELATED 262 582 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0327 Prci-Chr5 4386161 4388377 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0327 32 575 Receptor kinase-like Gene Family AT5G38260 37.113 3.50e-114 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci5g0327 Pkinase 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0327 - - lang:109328752 717.613