Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0313 ATGTCTGTGTCCCCGAACCACCTAGTCACTCTTGACCTGTTCTGCAATGAAGCAGCTAGCGAGGTGGTTGCATCGGATTCCAAAATTGCCAGCTGTGAATCATTGGCGGATTCGAGTGTCTTGTGGGATTCCGATGATGGAAGCTGTGCCTTGACCTTACTGGACTCCGAACTTGATCTAATACAGGAAAGACACCAGTCACTGGCACTGCTTCACGGAAAAGCATGGCTCAGAACTGCTCGAGAAGAAGCCATAAAGTGGATGCTAAAGGTGCAAGGTTACTACAGTTTTACACCAGAGACGGCATGTCTATCCGTGAACTATCTTGATCGTTTTCTTTTGTCACACTCATTGCCGCAAGATGAAGCGTGGCCATTGCAGCTAGCAGCAGTTGCTTGTCTGTCCATCGCAGCAAAAATGGAAGAAACAAGGGTCCCACTTTTACTAGACTTACAGATGATAGAGTCTAGGTTCGTGTTTGAGCCTAAAACAGTTCAAAGAATGGAGCTATTGGTCATGGCCGCCCTCAGGTGGCGATTGCGCATTGTTACTCCTTTTGATTTTGCTCATCTTTTCATTGCTAAGGCTAAGCTATCATGCTCTGCCTCCTGTCACATTAATATTTCTCTCGTCTCAGATGTTATTATCAGAACATGCTTAGTAATCGATTTCTTAGAGTATCCTCCATCTGTAATAGCAGCAGCTGCTCTGCTTTGGACAACCAATGACCAGAATATAAGATTCTTCCATGAAAGCATAAATAAAGATATGGTGCAGCAATGTTTGAACCTCATGAAGCAGAGGATTTTCCGGTCGGAACATTTTGCAGCGACGAATTTAGATTCATTGCCTCTAAGTCCTACTTGTGTGCTTGATCTCGCGGCAATGCAAGAGAGCAGCATGTATCACAGGCCCTGA 918 0.451 MSVSPNHLVTLDLFCNEAASEVVASDSKIASCESLADSSVLWDSDDGSCALTLLDSELDLIQERHQSLALLHGKAWLRTAREEAIKWMLKVQGYYSFTPETACLSVNYLDRFLLSHSLPQDEAWPLQLAAVACLSIAAKMEETRVPLLLDLQMIESRFVFEPKTVQRMELLVMAALRWRLRIVTPFDFAHLFIAKAKLSCSASCHINISLVSDVIIRTCLVIDFLEYPPSVIAAAALLWTTNDQNIRFFHESINKDMVQQCLNLMKQRIFRSEHFAATNLDSLPLSPTCVLDLAAMQESSMYHRP 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0313 305 Gene3D - 78 181 - -
Prci5g0313 305 Gene3D - 182 246 - -
Prci5g0313 305 Pfam Cyclin, N-terminal domain 79 180 IPR006671 -
Prci5g0313 305 SUPERFAMILY Cyclin-like 70 180 IPR036915 -
Prci5g0313 305 SMART cyclin_7 86 174 IPR013763 -
Prci5g0313 305 FunFam D6-type cyclin 64 181 - -
Prci5g0313 305 Pfam Cyclin, C-terminal domain 183 269 IPR004367 -
Prci5g0313 305 SUPERFAMILY Cyclin-like 165 266 IPR036915 -
Prci5g0313 305 CDD CYCLIN_AtCycD-like_rpt2 183 265 - -
Prci5g0313 305 ProSitePatterns Cyclins signature. 81 112 IPR006671 -
Prci5g0313 305 CDD CYCLIN_AtCycD-like_rpt1 80 178 - -
Prci5g0313 305 PANTHER CYCLINS 79 269 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0313 Prci-Chr5 4290459 4291947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0313 1 266 Core Cell Cycle Gene Families AT1G70210 41.727 9.33e-57 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0313 K18810 - gmx:100799323 322.783